Herbaspirillum rubrisubalbicans: Hrubri_2223
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Entry
Hrubri_2223 CDS
T04238
Symbol
cirA
Name
(GenBank) TonB-dependent siderophore receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_2223 (cirA)
Transporters [BR:
hrb02000
]
Other transporters
Pores ion channels [TC:
1
]
Hrubri_2223 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ALU89414
LinkDB
All DBs
Position
2559373..2561826
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AA seq
817 aa
AA seq
DB search
MNFSSEMPNPSCLPSSPCHAGRPGQGLWRLLLAWSLLLVSVAGWSQELDPARRHYQISAG
PLEDALNRFARQAAITLSYAPDMVQGRQAPALQGDLAVEEGLARLLVGSGLRAVRAGHGS
YAVQWELPSWSQGAAVPQQAQPLKLVTIVGGRDPLVAGDDESGYAASSSQTATRTATPLL
EIPQSLSVVGRAEMEARGADSILDVLRYLPGANTETHGVDPRGYDYFNLRGFINAQNTSN
YLNGLRQMVSGFGMFRTEAYGLERVEVLRGAASASFGQADPGGVVNRISKLAGSDAPDEI
LASLGNFQRRQLAADLSGHADDGRLQGRIVGLALDSHTQFSYGNGRAVENDRLYLAPSLK
LQLAPQTSLILLADYLQDRNGSGRWTAVRPDGSLTHTLVGDPGIDQQRGEQWSLGWQLEH
RLDDQWRLQQDFRQAGLRSQYSVLNPGSLNGNLLARSSARYDTQLESSQLDTRLQGQWRQ
GALDHTLLLGLDLTRLRQREQRYRGDAPSLDLAQPVYGLPIAMASQLVAQLAEDMQQSGL
YLQDQIRQGPLVWTLGSRYDRVIDTNRNTLAQTRQDTRAHAWSHRLGVSWKLTPTLAPYL
NYSTAFLPQPGQDANGQPFAPTHARQLEAGLKFQPQQGRAIYTAALFQITKDHVLSNDPG
HANFYVDQSQVRSRGLELEARGELWPGLNLLAAYSYTQALNIAQADPGLLGKSPVLVPRQ
AASLWLDYTPGDAWPGLGLGGGARYSGASYANADNSVRNAATVLLDAMLRLDQGRWRYSL
NVSNLANRRNTSCLAEPTLTCFWAEERMAVLSARYRW
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcttccgagatgcccaacccaagctgcctgccatcctcaccttgccatgct
ggccgccccggccaggggctgtggcgcttgctgctggcctggagcctgctgctggtgagc
gtggcgggctggtcgcaagagcttgacccggcccgacgccactaccagatcagcgccggc
ccgctggaggacgccctgaatcgcttcgcgcggcaggccgccatcaccttgtcctacgcg
ccagacatggtgcagggacggcaggcgcccgcgctgcaaggcgatctggccgtggaagag
gggttggcgcgcctgctggtcggcagtggtctgcgggcggtgcgtgccggtcatggtagc
tatgccgtgcagtgggaactgccctcgtggtcgcagggtgcagcggtgccgcagcaggcg
caacccctcaaactggtcaccatcgttggtggccgcgatccgctggtggcgggcgacgat
gaatccggctacgccgccagcagcagccagaccgccacccgcacggccacgcccttgctg
gagatcccgcaatcgctgtcggtggtggggcgggcggagatggaggcgcgtggcgccgac
agcatcctggacgtgctgcgctatctgcccggcgccaataccgagacccacggggtcgat
ccgcgcggttacgactatttcaacctgcgtggcttcatcaatgcccagaacaccagcaat
tacctcaatggcctgcgccagatggtgtccggcttcggcatgttccgcaccgaagcctac
gggctggagcgggtcgaagtgctgcgcggcgcggcctcggccagcttcgggcaggccgat
ccgggcggggtggtcaatcgcatcagcaagctggccggcagcgacgccccggatgagatc
ctggcgtcgctgggcaatttccagcgccgccaactggccgccgacctgagcggccacgcc
gacgatggccggttgcaggggcgtatcgtcgggctggcgctggacagccacacccagttc
agttacggcaatggccgcgccgtcgagaacgatcgtctctatctggcgccttcgctgaag
ctgcaactggcaccgcagaccagcctgatcctgctggccgattatctgcaagaccgcaat
ggcagcggtcgctggacggcggtgcggcccgatggcagcctcacgcataccctggtgggt
gaccccggcatcgatcagcagcgcggcgagcaatggtcgctgggctggcaactggagcat
cgtctcgacgatcagtggcgcctgcagcaggatttccgccaagccggcctgcgctcgcag
tactcggtgttgaatcccggcagcctcaacggcaacctgctggcgcgcagcagcgcccgt
tacgatacccagcttgagagcagccagctcgatacccgcctgcagggccagtggcggcag
ggcgcgcttgaccacaccctgctgctggggctggacctgacgcgcctgcgccagcgcgag
cagcgctatcgcggcgatgcacccagcctggatctggcgcaaccggtgtatgggctgccc
attgccatggcctcgcagttggttgcgcaattggcagaagacatgcagcaaagtggcctc
tacctgcaggaccagatccgccaggggccgctggtgtggaccctgggcagccgctacgat
cgcgtcatcgataccaaccgcaatacgctggcccagacgcgccaggacacccgggctcac
gcctggagccatcgcctcggcgtctcttggaagctcacccccacgctggcgccttacctt
aactacagcaccgccttcctaccccagcctggccaggatgccaatggccagccctttgcc
cccactcatgcacgtcagctcgaagccggcctcaagttccagccgcagcaggggcgggcg
atctacacggcggcattgttccagatcaccaaggatcacgtgctctcgaacgatcctggt
catgccaatttctacgttgaccagagccaggtgcgctcgcgcgggctggaactggaagca
cgcggcgaactgtggccgggcctgaacctgctggccgcctatagctatacccaggccctc
aatatcgcccaggccgatcccggcttgctgggcaagtcgccggtgctggtgccgcgtcag
gccgccagcctgtggctggactacaccccgggcgatgcctggcccggcctggggctgggc
ggcggcgcgcgctacagtggcgccagctacgccaatgccgacaacagcgtgcgcaatgcc
gccaccgtgctgctggacgccatgctgcggctggaccaggggcgctggcgctacagcctc
aacgtcagcaacctggccaaccggcgcaatacctcttgcctggccgaacccacgctgacc
tgtttctgggccgaagaacggatggcggtcttgagtgcccgttatcgttggtag
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