Herbaspirillum rubrisubalbicans: Hrubri_2253
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Entry
Hrubri_2253 CDS
T04238
Name
(GenBank) Beta-ketoacyl synthase
Organism
hrb
Herbaspirillum rubrisubalbicans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
KAsynt_C_assoc
PP-binding
adh_short
CurL-like_PKS_C
RhiE-like_linker
adh_short_C2
Epimerase
3Beta_HSD
Thiolase_N
ACP_SdgA_C
GDP_Man_Dehyd
Polysacc_synt_2
Sacchrp_dh_NADP
Beta-ketacyl_N
Motif
Other DBs
NCBI-ProteinID:
ALU89443
LinkDB
All DBs
Position
2624868..2629403
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AA seq
1511 aa
AA seq
DB search
MNQDTHDFNGVEIAIIGMAGRFPQADDVEALWRNVCAGVESVTALSEEALLARGVSAEAL
ADPAYVRKGVLLDDIECFDAAHFGYSPREAERMDPQHRLLLEIAWQALEHAGYGARHPEL
LTGIYAGSGPSLYLHRHLMPQIDLAQGDIAGLLGLLNGSDPDALVTRIAYKLDLKGPAVA
VQTACSTSLAAVHLACRGLLNHEADLALAGGVWLNLLQGRGYRYQAGAILSPDGHCRPFD
AQAGGTAIGSGAGLVVLKRLADARADGDTIHAVIRGSAMNNDGADKIGYTAPSIAGQAAV
IMAAHAMAEVSPQSIGYVEAHGTATALGDPIEAAALMQAFGSASGEPFCALGSLKGNIGH
LDAAAGVAGLIKTVQAIRQGILPPSLNFRQANAQITFSGSPFYVNTVTQPWPQQRWPRRA
GVSSFGMGGTNVHVVLEQAPAPMREALSAAPQERPRLLLLSARTDTALQQICTRLAQHLA
QDDTLGLADVAFTLRRGRKQLAHRAALLVKGHADALEQLRHQATNHSSPSLSGLAPAAVF
LFPGQGAQHANMGRAAYADHPRVRQVVDHCCTLLQPHLGLDLRELLFPAPGTEAEAGQRL
AQTALTQPALFVVEYALAQWWLEQGLRPDAMLGHSIGEYVAATLAGVFSLEDALTVIAAR
GRLLQQTEAGSMLSVPLSEACLREQALAGCDLAAVNGPELCVLAGSAQAIAQAKATLATR
GVESRALQVSHAFHSARVEPMLAAFGELLGRVPLQAPQLPFVSNVSGTWITEQQARSPAY
WVQHVRATVRFADGLALLAGQTARVWLEVGPGDTLTTLTRRHPQASQHPALASQRHPRQV
DAGVDPLLQCLGRLFTCGLDISHAPVLDETPARRVPLPTYPFAREPYWIEPAGAVLQPRQ
PTITNDPGRWLYLPTWRRARPVQACASRMAGSSVVVVLLCAQAALNEAVCEQLRQQGKRV
VQVEPGRIYAQLAAQRFSRAGNSRADFTELFAGVDAAVAAFDAVCDLSNVGPVAPGAHSE
HSLFGLLALIQALGQYQRQPLRLVVVASQLHQVTGAERISSAKASLLGLCRVAPLEYPQL
ACGVIDIEEPTDAHQVARVGQQIADEIGDGDQAALVAYRGRQRWIRHYQPASFAPGCQPE
LRQGGVYLITGGLGGVGLALARHLAQHWQARLVLMGRTLSAAQQAAVAELESLGAQVWVR
QGDVTDGPVVQALVAEIVRELGALHGVIHAAGLPGGGLMAQRQRNAIEQVFAAKVQGAHH
VLTAVASHAPDFVLLCSSMSAITGDYGQADYCAANCVLDAMAAASRSETRVLSVNWDVWP
GTGMAAALRAEEGDGDLGIAPHQAGALLEQVLCDAGSSQVLVSSISLAEQFARAGRGTAA
TLDPAALAPVAARPVHARPALSAPYVEPVQELERGVAALWSEFLGITPVGLDDNLFELGG
DSLLAIQLLASLRQRYGVDVQPASFFQSPTVRTLACQVEERLIEEIEQEASAPSDQLAKT
PEAVAPRIASV
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggatacgcacgatttcaatggtgtggagatcgccatcatcgggatggccgga
cgttttccgcaggccgatgatgtggaggcgctctggcgcaatgtgtgcgcaggcgtcgaa
tcggtcaccgccctgagcgaagaagcgctgctggcacgcggcgtcagcgccgaggcactg
gccgatcccgcctatgtgcgcaagggggtgctgctggacgatatcgaatgcttcgatgct
gcccatttcggctattctccgcgcgaggcagagcgcatggatccgcaacatcgcctgctg
ctcgagatcgcctggcaggcactggagcacgcgggctatggcgctcgccatcccgaacta
ctgaccggcatctacgccggcagcggccccagtctctacctgcaccggcacctgatgccg
cagattgatctggcgcagggcgatattgccggcctgctgggattgctcaacggtagcgac
ccggacgcgctggtcacgcgcatcgcgtacaagctcgatctcaaggggccagcggtggcg
gtgcagaccgcgtgttcgacctcgctggccgccgtgcacctggcttgccgcggcttgctc
aatcatgaagcggacctggccctggccggtggcgtctggctcaacctcttgcagggacgc
ggctaccgctaccaggctggcgccatcctctcgccagacggccattgccgaccgttcgat
gcccaggctggcggcactgccatcggtagcggcgctggtctggtcgtgctcaaacggctg
gcggatgcgcgcgctgatggtgacacgatccatgctgtgatccgtggctcggccatgaac
aatgatggtgcagacaagataggctataccgctcccagcatcgccggccaggcggccgtg
atcatggcggcgcacgccatggccgaggtgagcccgcagagtatcggctatgtcgaggcg
catggcactgccacggcgctgggcgacccgattgaagcggcagctctgatgcaggccttc
gggagtgccagcggagagccattttgcgcgctcggttcgctcaagggcaatatcggccac
ctcgatgcagctgccggcgtggcagggctgatcaagacggtgcaggccatcaggcagggg
atcctgccgcccagcctgaattttcggcaagcgaatgcccagatcacgttttccggcagc
cctttctacgtcaacaccgtcacccagccgtggccgcagcagaggtggccacggcgggcc
ggggtcagctcctttggcatgggcggcaccaatgtccacgtggtgctggagcaagccccg
gcaccgatgcgcgaggccctgtcggccgcgccgcaagagcggccgcgcctgctgctgttg
agtgcgcgcaccgacacggccttgcagcagatctgcacacgactggcgcagcatctggcg
caggatgacacgctgggtctggccgatgtggcattcaccttgcgccggggccgcaagcaa
ttggcccatcgtgccgcgctgctggtgaaggggcatgccgatgccctggagcagttgcgt
caccaggccacgaatcattcgtcgccgagcctgtccgggcttgcgccagcggcggtcttc
ctgttccccggccagggcgcccagcacgccaacatgggacgggcagcctacgcagaccat
ccgcgcgtgcgccaggtggtcgatcattgctgcaccctgttgcagccccatctcggcctg
gatctgcgtgaactgctgtttcctgcgcctggcacagaagccgaggcgggacagcgcctg
gcgcagaccgcgctgacccagccggccttgttcgtcgtggaatatgcgctcgcccaatgg
tggctggagcaagggttgcggccggatgcgatgctgggccacagcatcggcgaatacgtt
gctgccaccctggccggcgtgttctcgctggaagacgcgctgacggtgatcgccgcgcgc
gggcgtctgttgcaacagaccgaagcaggttccatgctctccgtcccactcagcgaggct
tgcctgcgcgagcaggcgctggcggggtgcgacctggcggcggtcaatggccctgaactg
tgcgtgctggccggatcggcgcaggccatcgcgcaggccaaggcaaccctggcaacccgt
ggtgtggaaagcagggccttgcaggtctcacatgcgtttcattcggcccgcgttgaaccc
atgctggcggccttcggcgagttgctgggccgggtcccgttgcaggcaccacagttgcct
ttcgtctccaatgtcagcggtacctggatcacagaacagcaagcccgtagcccggcgtat
tgggtccagcatgtgcgggccacagtccgcttcgccgatggcctggcgctgctggccggc
cagaccgcgcgggtatggctggaagttggccccggggatacgctgaccaccctgacacgt
cgccatccccaggcgagccagcatcccgcgctcgcgtcacagcgccatccacgccaagtc
gatgctggcgtcgaccccttactgcaatgtctcggaagactcttcacctgcggactggat
atctcgcacgcgccggtgctcgacgagacccctgcgcggcgggtgccgctgccgacctat
ccgttcgcccgcgagccgtattggatcgaacccgctggcgcagtgttgcagccacgccag
cccacgatcaccaacgatccgggccgctggctgtatctccccacctggcgtcgcgcccgg
ccagtgcaagcctgtgcgtcccggatggcgggcagctccgtagtggtagtgctgctgtgc
gcgcaagctgcgctcaatgaggccgtctgcgagcaactgcgtcagcagggcaagcgcgtg
gtgcaggtcgagccggggcgcatctacgcgcagctggcagcgcagcgtttcagtcgcgcc
ggtaacagccgcgccgatttcactgaactgttcgctggcgtggacgccgcagtcgctgcc
tttgacgcggtctgcgacctttccaatgtcgggcccgttgcgcctggcgcgcacagcgaa
cacagcctgttcgggctgctggcgctgatccaggcactgggtcagtaccagcgccagccg
cttcggctggtcgtggttgccagccaactacatcaggtcaccggcgctgaacgtatcagc
agcgccaaggccagcctgctcggcctgtgccgggtggcaccgctggaatatcctcaattg
gcatgcggcgtgatcgacatcgaagagcccaccgatgcacaccaggtggcacgcgtgggc
caacagattgctgacgagattggcgacggcgaccaggcagcgctggtggcctatcgtggc
cgccagcgttggatccgacattaccagccagccagtttcgcgccgggatgccagcccgaa
ctgcggcagggaggtgtgtacctgatcacgggcggactgggtggcgtcggtctggcgttg
gcgcgccatttggcgcagcactggcaggcgcgattggtgctgatgggccgcaccctgtcg
gccgcgcagcaggcagctgtggctgaattggaatcgctgggcgcgcaggtctgggtgcgt
cagggtgacgtcacggacgggccggtggtgcaggcactggtggccgagatcgtgcgcgag
ctgggcgccttgcatggcgtgatccatgcggcaggacttcctggtggcggcctgatggcc
cagcgtcagcgcaatgccatcgaacaggtgtttgcggccaaggtgcagggcgcccaccac
gtgctgacagccgtggcctcgcatgcgccggacttcgtgctgttgtgttcctccatgagc
gccatcaccggcgactacggtcaggccgactattgcgcggccaactgcgtgctcgacgcc
atggcggccgcttcgcgtagtgagacccgggtgttgtcagtgaactgggatgtctggccc
ggtaccgggatggccgccgcgctgcgcgccgaggagggcgacggtgacctcggcatcgcc
ccgcatcaggctggcgccttgctggaacaggtgctgtgcgacgccggcagcagccaggtg
ctggtttcctccatcagtctggccgagcagttcgcgcgggcgggtcggggcacggcggca
acgctggaccctgcggcccttgcaccagtggcagcgcgtcccgttcatgcgcgccccgcg
ttgagtgccccctatgtcgaaccggtccaggagctggagcgcggtgtggcagcgctatgg
agcgagttcctcggtatcacgcccgtggggctggacgacaacctgtttgaactggggggc
gattcgctgctggccatccaattgctggccagtctgcgccagcgctacggcgtggacgtc
caaccagcttccttcttccagtcaccaaccgtccgcacgctggcttgccaggtcgaagag
cggctcatcgaagaaatcgaacaggaggcctcggcgccctccgatcagttagccaaaacg
cccgaggccgtggctccccgaattgcatccgtttaa
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