KEGG   Herbaspirillum rubrisubalbicans: Hrubri_2253
Entry
Hrubri_2253       CDS       T04238                                 
Name
(GenBank) Beta-ketoacyl synthase
Organism
hrb  Herbaspirillum rubrisubalbicans
SSDB
Motif
Pfam: ketoacyl-synt Acyl_transf_1 KR Ketoacyl-synt_C KAsynt_C_assoc PP-binding adh_short CurL-like_PKS_C RhiE-like_linker adh_short_C2 Epimerase 3Beta_HSD Thiolase_N ACP_SdgA_C GDP_Man_Dehyd Polysacc_synt_2 Sacchrp_dh_NADP Beta-ketacyl_N
Other DBs
NCBI-ProteinID: ALU89443
LinkDB
Position
2624868..2629403
AA seq 1511 aa
MNQDTHDFNGVEIAIIGMAGRFPQADDVEALWRNVCAGVESVTALSEEALLARGVSAEAL
ADPAYVRKGVLLDDIECFDAAHFGYSPREAERMDPQHRLLLEIAWQALEHAGYGARHPEL
LTGIYAGSGPSLYLHRHLMPQIDLAQGDIAGLLGLLNGSDPDALVTRIAYKLDLKGPAVA
VQTACSTSLAAVHLACRGLLNHEADLALAGGVWLNLLQGRGYRYQAGAILSPDGHCRPFD
AQAGGTAIGSGAGLVVLKRLADARADGDTIHAVIRGSAMNNDGADKIGYTAPSIAGQAAV
IMAAHAMAEVSPQSIGYVEAHGTATALGDPIEAAALMQAFGSASGEPFCALGSLKGNIGH
LDAAAGVAGLIKTVQAIRQGILPPSLNFRQANAQITFSGSPFYVNTVTQPWPQQRWPRRA
GVSSFGMGGTNVHVVLEQAPAPMREALSAAPQERPRLLLLSARTDTALQQICTRLAQHLA
QDDTLGLADVAFTLRRGRKQLAHRAALLVKGHADALEQLRHQATNHSSPSLSGLAPAAVF
LFPGQGAQHANMGRAAYADHPRVRQVVDHCCTLLQPHLGLDLRELLFPAPGTEAEAGQRL
AQTALTQPALFVVEYALAQWWLEQGLRPDAMLGHSIGEYVAATLAGVFSLEDALTVIAAR
GRLLQQTEAGSMLSVPLSEACLREQALAGCDLAAVNGPELCVLAGSAQAIAQAKATLATR
GVESRALQVSHAFHSARVEPMLAAFGELLGRVPLQAPQLPFVSNVSGTWITEQQARSPAY
WVQHVRATVRFADGLALLAGQTARVWLEVGPGDTLTTLTRRHPQASQHPALASQRHPRQV
DAGVDPLLQCLGRLFTCGLDISHAPVLDETPARRVPLPTYPFAREPYWIEPAGAVLQPRQ
PTITNDPGRWLYLPTWRRARPVQACASRMAGSSVVVVLLCAQAALNEAVCEQLRQQGKRV
VQVEPGRIYAQLAAQRFSRAGNSRADFTELFAGVDAAVAAFDAVCDLSNVGPVAPGAHSE
HSLFGLLALIQALGQYQRQPLRLVVVASQLHQVTGAERISSAKASLLGLCRVAPLEYPQL
ACGVIDIEEPTDAHQVARVGQQIADEIGDGDQAALVAYRGRQRWIRHYQPASFAPGCQPE
LRQGGVYLITGGLGGVGLALARHLAQHWQARLVLMGRTLSAAQQAAVAELESLGAQVWVR
QGDVTDGPVVQALVAEIVRELGALHGVIHAAGLPGGGLMAQRQRNAIEQVFAAKVQGAHH
VLTAVASHAPDFVLLCSSMSAITGDYGQADYCAANCVLDAMAAASRSETRVLSVNWDVWP
GTGMAAALRAEEGDGDLGIAPHQAGALLEQVLCDAGSSQVLVSSISLAEQFARAGRGTAA
TLDPAALAPVAARPVHARPALSAPYVEPVQELERGVAALWSEFLGITPVGLDDNLFELGG
DSLLAIQLLASLRQRYGVDVQPASFFQSPTVRTLACQVEERLIEEIEQEASAPSDQLAKT
PEAVAPRIASV
NT seq 4536 nt   +upstreamnt  +downstreamnt
atgaatcaggatacgcacgatttcaatggtgtggagatcgccatcatcgggatggccgga
cgttttccgcaggccgatgatgtggaggcgctctggcgcaatgtgtgcgcaggcgtcgaa
tcggtcaccgccctgagcgaagaagcgctgctggcacgcggcgtcagcgccgaggcactg
gccgatcccgcctatgtgcgcaagggggtgctgctggacgatatcgaatgcttcgatgct
gcccatttcggctattctccgcgcgaggcagagcgcatggatccgcaacatcgcctgctg
ctcgagatcgcctggcaggcactggagcacgcgggctatggcgctcgccatcccgaacta
ctgaccggcatctacgccggcagcggccccagtctctacctgcaccggcacctgatgccg
cagattgatctggcgcagggcgatattgccggcctgctgggattgctcaacggtagcgac
ccggacgcgctggtcacgcgcatcgcgtacaagctcgatctcaaggggccagcggtggcg
gtgcagaccgcgtgttcgacctcgctggccgccgtgcacctggcttgccgcggcttgctc
aatcatgaagcggacctggccctggccggtggcgtctggctcaacctcttgcagggacgc
ggctaccgctaccaggctggcgccatcctctcgccagacggccattgccgaccgttcgat
gcccaggctggcggcactgccatcggtagcggcgctggtctggtcgtgctcaaacggctg
gcggatgcgcgcgctgatggtgacacgatccatgctgtgatccgtggctcggccatgaac
aatgatggtgcagacaagataggctataccgctcccagcatcgccggccaggcggccgtg
atcatggcggcgcacgccatggccgaggtgagcccgcagagtatcggctatgtcgaggcg
catggcactgccacggcgctgggcgacccgattgaagcggcagctctgatgcaggccttc
gggagtgccagcggagagccattttgcgcgctcggttcgctcaagggcaatatcggccac
ctcgatgcagctgccggcgtggcagggctgatcaagacggtgcaggccatcaggcagggg
atcctgccgcccagcctgaattttcggcaagcgaatgcccagatcacgttttccggcagc
cctttctacgtcaacaccgtcacccagccgtggccgcagcagaggtggccacggcgggcc
ggggtcagctcctttggcatgggcggcaccaatgtccacgtggtgctggagcaagccccg
gcaccgatgcgcgaggccctgtcggccgcgccgcaagagcggccgcgcctgctgctgttg
agtgcgcgcaccgacacggccttgcagcagatctgcacacgactggcgcagcatctggcg
caggatgacacgctgggtctggccgatgtggcattcaccttgcgccggggccgcaagcaa
ttggcccatcgtgccgcgctgctggtgaaggggcatgccgatgccctggagcagttgcgt
caccaggccacgaatcattcgtcgccgagcctgtccgggcttgcgccagcggcggtcttc
ctgttccccggccagggcgcccagcacgccaacatgggacgggcagcctacgcagaccat
ccgcgcgtgcgccaggtggtcgatcattgctgcaccctgttgcagccccatctcggcctg
gatctgcgtgaactgctgtttcctgcgcctggcacagaagccgaggcgggacagcgcctg
gcgcagaccgcgctgacccagccggccttgttcgtcgtggaatatgcgctcgcccaatgg
tggctggagcaagggttgcggccggatgcgatgctgggccacagcatcggcgaatacgtt
gctgccaccctggccggcgtgttctcgctggaagacgcgctgacggtgatcgccgcgcgc
gggcgtctgttgcaacagaccgaagcaggttccatgctctccgtcccactcagcgaggct
tgcctgcgcgagcaggcgctggcggggtgcgacctggcggcggtcaatggccctgaactg
tgcgtgctggccggatcggcgcaggccatcgcgcaggccaaggcaaccctggcaacccgt
ggtgtggaaagcagggccttgcaggtctcacatgcgtttcattcggcccgcgttgaaccc
atgctggcggccttcggcgagttgctgggccgggtcccgttgcaggcaccacagttgcct
ttcgtctccaatgtcagcggtacctggatcacagaacagcaagcccgtagcccggcgtat
tgggtccagcatgtgcgggccacagtccgcttcgccgatggcctggcgctgctggccggc
cagaccgcgcgggtatggctggaagttggccccggggatacgctgaccaccctgacacgt
cgccatccccaggcgagccagcatcccgcgctcgcgtcacagcgccatccacgccaagtc
gatgctggcgtcgaccccttactgcaatgtctcggaagactcttcacctgcggactggat
atctcgcacgcgccggtgctcgacgagacccctgcgcggcgggtgccgctgccgacctat
ccgttcgcccgcgagccgtattggatcgaacccgctggcgcagtgttgcagccacgccag
cccacgatcaccaacgatccgggccgctggctgtatctccccacctggcgtcgcgcccgg
ccagtgcaagcctgtgcgtcccggatggcgggcagctccgtagtggtagtgctgctgtgc
gcgcaagctgcgctcaatgaggccgtctgcgagcaactgcgtcagcagggcaagcgcgtg
gtgcaggtcgagccggggcgcatctacgcgcagctggcagcgcagcgtttcagtcgcgcc
ggtaacagccgcgccgatttcactgaactgttcgctggcgtggacgccgcagtcgctgcc
tttgacgcggtctgcgacctttccaatgtcgggcccgttgcgcctggcgcgcacagcgaa
cacagcctgttcgggctgctggcgctgatccaggcactgggtcagtaccagcgccagccg
cttcggctggtcgtggttgccagccaactacatcaggtcaccggcgctgaacgtatcagc
agcgccaaggccagcctgctcggcctgtgccgggtggcaccgctggaatatcctcaattg
gcatgcggcgtgatcgacatcgaagagcccaccgatgcacaccaggtggcacgcgtgggc
caacagattgctgacgagattggcgacggcgaccaggcagcgctggtggcctatcgtggc
cgccagcgttggatccgacattaccagccagccagtttcgcgccgggatgccagcccgaa
ctgcggcagggaggtgtgtacctgatcacgggcggactgggtggcgtcggtctggcgttg
gcgcgccatttggcgcagcactggcaggcgcgattggtgctgatgggccgcaccctgtcg
gccgcgcagcaggcagctgtggctgaattggaatcgctgggcgcgcaggtctgggtgcgt
cagggtgacgtcacggacgggccggtggtgcaggcactggtggccgagatcgtgcgcgag
ctgggcgccttgcatggcgtgatccatgcggcaggacttcctggtggcggcctgatggcc
cagcgtcagcgcaatgccatcgaacaggtgtttgcggccaaggtgcagggcgcccaccac
gtgctgacagccgtggcctcgcatgcgccggacttcgtgctgttgtgttcctccatgagc
gccatcaccggcgactacggtcaggccgactattgcgcggccaactgcgtgctcgacgcc
atggcggccgcttcgcgtagtgagacccgggtgttgtcagtgaactgggatgtctggccc
ggtaccgggatggccgccgcgctgcgcgccgaggagggcgacggtgacctcggcatcgcc
ccgcatcaggctggcgccttgctggaacaggtgctgtgcgacgccggcagcagccaggtg
ctggtttcctccatcagtctggccgagcagttcgcgcgggcgggtcggggcacggcggca
acgctggaccctgcggcccttgcaccagtggcagcgcgtcccgttcatgcgcgccccgcg
ttgagtgccccctatgtcgaaccggtccaggagctggagcgcggtgtggcagcgctatgg
agcgagttcctcggtatcacgcccgtggggctggacgacaacctgtttgaactggggggc
gattcgctgctggccatccaattgctggccagtctgcgccagcgctacggcgtggacgtc
caaccagcttccttcttccagtcaccaaccgtccgcacgctggcttgccaggtcgaagag
cggctcatcgaagaaatcgaacaggaggcctcggcgccctccgatcagttagccaaaacg
cccgaggccgtggctccccgaattgcatccgtttaa

DBGET integrated database retrieval system