KEGG   Herbaspirillum rubrisubalbicans: Hrubri_2308
Entry
Hrubri_2308       CDS       T04238                                 
Name
(GenBank) EvpB/family type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hrb02044]
    Hrubri_2308
Secretion system [BR:hrb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Hrubri_2308
SSDB
Motif
Pfam: VipB VipB_2 T6SS_VipA
Other DBs
NCBI-ProteinID: ALU89493
LinkDB
Position
2696757..2699366
AA seq 869 aa
MTESIQQKLLRVRPPRVKITYDVETGGAMEKQELPFIVGIFADLSGDRDPADTLASRPLK
ERQMTDIDRDNFNAIMKSIGPRVDLTKVPKDVPAAASLLGTPGDKQIVFESLDDFEPMQI
IRKLPSLNDLYQSRGLIRSLQAKYEADDETAHHLDALLQNEDPTTQASTFKLMGKFDAVA
ETERPALRHALFGLFDTVNQGADADKAKVYPTWSLMAVADAAEKDKDKLAKLVAAADPKA
VALSQALAAKDTTDNRVKAKLLVEQLQLPGAPAADATEEVKAPFTKRDKLLAQLGFDPVT
ADKTLDQSVIDIKSATLASGMNLPAGDPLWRKPLMLLGLSMPDDDARDAFLHFADYLQAL
AATGPSAEQLAMVAAVAPLLQTDAARVLLWLHHYASQVADLMKEEQQLQGLMAAQKRGSA
AVIDELVARIDQLLSIALTAVLHCAGFKRMEATWRGLAHLVFNTETSTKLKLRVFNATQD
ELIKDMSKAVEFDQSALFKLIYEAEYGTYGGFPYSLLIGDYELGADAADIEFLKKMSEVA
ASAHAPFIAAASTAMFGLSGFDKLDKPRDLAKIFENAELTAWREFREMEDSRYVTLVLPR
VLLRLPYGKAEKRNTTPCEGINFEEDVSGANLRPYLNAKGEITGYPKPDNQSFLWGNAAF
VLAERITNAFALYNWTAAIRGVEGGGLVENLPLYTYTSDSGSSELFCPIEVSITDRREKE
LNDLGFISLIHCKGSGHAAFFGGQTTNLPKKYFSDSANANAKISSMLPYILAASRFAHYI
KVIMRSKIGSFMTRENVESFLNNWITNYVLLDDNAAQNAKAAFPLREASVVVTDVPGQPG
AYRATVFLKPHFQLEELTTSIRLVADLPS
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgacagaaagcattcagcaaaaactactgcgggtaaggccaccaagggtgaagatcacc
tacgacgtggaaactggtggcgccatggaaaaacaggagttgccgttcatcgtggggatc
tttgccgatctctcaggtgaccgcgatcccgcggacactctggcctcccggccactgaaa
gaacgccagatgaccgacatcgatcgtgacaatttcaacgccatcatgaagtcgatcgga
ccgcgcgtggatctgaccaaggtgcccaaggacgtgcctgcggccgcatcgctgctgggg
acgccgggcgacaagcagatcgtcttcgagagcctcgatgatttcgagccgatgcagatc
atccgcaagctgccctcgctgaatgacctgtaccagtcacgcggcctgatccgcagcttg
caggcgaaatacgaagccgatgacgaaaccgctcaccatctggatgccctgctgcagaac
gaagacccgaccacgcaggcatccacgttcaagctgatgggcaagttcgatgccgtcgct
gaaaccgagcgcccggcactgcgtcacgcgctgttcggtctgttcgacacggtcaatcaa
ggtgcggatgccgacaaggccaaggtctatccgacctggtccctgatggcggtggccgat
gcggccgagaaggacaaggacaagctggccaagctggttgccgctgccgaccccaaggcg
gtcgcactatcccaagcgcttgcggcaaaggatacgaccgacaatcgggtcaaggccaag
ctgctggtcgaacagttgcaactgcctggcgcgccggcagccgatgccaccgaggaggta
aaggcgcccttcaccaagcgcgataaactgctcgcccagctcggtttcgatccggtgacg
gcagacaaaacacttgaccagtcagtgattgacatcaagtcggccactctggccagcggc
atgaacctgccggcaggcgacccgctctggcgcaagccgctgatgctgctcggcctgagc
atgccggacgatgacgcgcgtgacgccttcctgcattttgcagattacctgcaagcgctc
gccgccaccggtcccagtgcagaacaactggcgatggtagccgcggtagcgccgctgctg
cagacggacgcggccagagtgttgctgtggctgcaccactacgctagccaggtcgccgac
ctgatgaaggaggagcagcaattgcaagggctgatggcggcacagaagcgcggttcggca
gcagtgatcgatgaactggttgcgcgcatcgaccagttgctcagcatcgcgctgaccgcc
gtgctgcactgcgctggcttcaagcgcatggaagccacttggcgtggcctggcgcacctg
gtgtttaacaccgagaccagcaccaagctcaagctgcgggtgttcaacgccacccaggac
gagctgatcaaggacatgagcaaggccgtcgaattcgaccagagcgctctgttcaagctg
atctacgaagccgaatacggcacctacggcggcttcccctacagcctgttgatcggcgac
tacgagctgggcgccgacgccgccgacatcgaattcctgaagaagatgtcggaagtcgcg
gcctccgcacatgcccctttcatcgccgccgcctcgaccgccatgttcggcctgtccggt
ttcgacaagctggacaagccgcgcgacttggccaagatcttcgagaatgccgaactgacg
gcatggcgcgagttccgcgagatggaagattcgcgttacgtcacgctggtgctgccacgc
gtgttgctgcgtctgccgtatggtaaggccgagaagcgcaataccacgccctgcgaaggt
atcaatttcgaagaggacgtcagcggtgccaacctgcgtccttatctgaacgccaaaggc
gagatcaccggctatcctaagccggacaaccagagcttcctgtggggcaacgccgccttc
gtactggccgaacgtatcaccaatgcctttgccctgtacaactggactgccgccattcgc
ggcgtggaaggcggcggtctggtggaaaatctgccgctctatacctacacctcggattcc
ggcagcagcgaactgttctgcccgatcgaagtgtcgatcaccgatcgccgtgaaaaggaa
ttgaacgacctaggcttcatttccctgatccactgcaagggctccggccacgctgccttc
ttcggcggccagaccaccaatcttcccaagaagtatttctcggacagcgccaatgccaat
gccaagatctcatcgatgctgccttatattctggccgcatcccgcttcgcgcattacatc
aaggtcatcatgcgcagcaagatcggcagcttcatgacgcgcgagaacgtcgagtccttc
ctcaataactggattaccaattacgttctgctcgacgataacgccgcccagaatgccaag
gccgcctttccgttgcgcgaagcgtcggtggtggtaaccgatgtcccgggacaaccgggc
gcctatcgcgccacggtcttcctgaagccgcacttccagttggaagagctgacgacctca
atccggctggtcgcggacctgcctagctaa

DBGET integrated database retrieval system