Herbaspirillum rubrisubalbicans: Hrubri_2586
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Entry
Hrubri_2586 CDS
T04238
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase (NADP) protein
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00020
Citrate cycle (TCA cycle)
hrb00480
Glutathione metabolism
hrb00720
Other carbon fixation pathways
hrb01100
Metabolic pathways
hrb01110
Biosynthesis of secondary metabolites
hrb01120
Microbial metabolism in diverse environments
hrb01200
Carbon metabolism
hrb01210
2-Oxocarboxylic acid metabolism
hrb01230
Biosynthesis of amino acids
hrb04146
Peroxisome
Module
hrb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hrb_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Hrubri_2586 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
Hrubri_2586 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Hrubri_2586 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Hrubri_2586 (icd)
Enzymes [BR:
hrb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Hrubri_2586 (icd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
ALU89767
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All DBs
Position
3009555..3011783
Genome browser
AA seq
742 aa
AA seq
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MTTGNPTIIYTLTDEAPYLATHSLLPIVKKFTAPAGIDVVESDISVAARILAEFPEFLTD
EQKVPDNLAALGALTQDPNANIIKLPNISASILQLQAAIRELQARGYKLPDYPENPSTEE
EKALQKRYAKITGSAVNPVLREGNSDRRAPNAVKNYARKHPHSMAKWSMASRTHVAHMHG
GDFYAGEKSLTLDKAVDVKMDLVTKSGETIVLKPKLSLQAGEIIDSMFMSKKALCAYYEE
QMQDAFETDLLLSVHVKATMMKVSHPIVFGHAVRTYYKDTFTKHAKLFAEIGVNPNNGMS
GVYEKINTLPEDKKAEVLADLKADEAKRPRLAMVDSAKGITNLHAPNDVIVDASMPAMIR
AGGKMWNAAGKTEDTKALLPESTFARIYQEMINFCKTNGAFDPTTMGTVPNVGLMAQKAE
EYGSHDKTFEIAQAGVARIVTLDGQVLLEQNVEEGDIWRMCQVKDAAVRDWVKLAVTRAR
LSGMPAVFWLDPYRPHEAELIKKVNTYLKDHDLTGADIQIMSQVRAMRYTLERVIRGLDT
ISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMFETGAGGSAPKHVQQLVGENH
LRWDSLGEFLALAVSIEEVGIKTGNNKAKILAKTLDAATGKLLDNNKSPSPKTGELDNRG
SHFYLALYWAQELAAQKDDAELAKQFAPLAKALADNEQKIVEELNSVQGKQVDIGGYYLP
DREKTFAVMRPSATLNQALESV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgactactggcaacccgaccatcatctatacgctgaccgacgaggcaccctatctggcg
acccactcgctcttgcccatcgtcaagaagttcaccgctccggctggcatcgacgtcgtc
gaaagcgatatctctgtggctgcgcgtatcctggctgaattcccggagttccttaccgat
gagcagaaagtccccgataacctggccgcactgggcgccctgacccaggaccccaacgcc
aacatcatcaagctgcccaacatcagcgcctccatcctgcaactgcaggcggccatccgc
gaactgcaggcacgtggctacaagctgcccgactacccggaaaacccgagcaccgaagaa
gaaaaggccctgcaaaagcgctacgccaagatcaccggcagcgccgtcaacccggtcctg
cgcgaaggcaactcggatcgccgcgcccccaacgccgtcaagaactacgcccgcaagcac
ccgcactcgatggccaagtggtccatggcctcgcgcacccacgtggcgcacatgcacggc
ggcgacttctacgccggcgaaaaaagcctgaccctggacaaggcggtcgacgtcaagatg
gacctggtcaccaagtcgggtgaaaccatcgtcttgaagcccaagctgtccctgcaagcc
ggtgaaatcatcgacagcatgttcatgagcaagaaggccctgtgcgcctactacgaagaa
cagatgcaagacgccttcgagaccgacctgctgctgtcggtgcacgtcaaggccaccatg
atgaaggtgtcgcacccgatcgtcttcggccacgccgtgcgtacctactacaaggacacc
ttcaccaagcacgccaagctgttcgccgagatcggcgtgaacccgaacaacggcatgtcc
ggcgtctacgaaaagatcaacaccctgcccgaagacaagaaggccgaagtgctggctgac
ctgaaggccgatgaagccaagcgtccgcgcctggccatggtggactccgccaagggcatc
accaacctgcacgcccccaacgacgtgatcgtcgatgcttccatgccggccatgatccgc
gccggcggcaagatgtggaacgcggccggcaagaccgaagacaccaaggccctgctgccg
gaatcgacctttgcccgtatctaccaggagatgatcaacttctgcaagaccaacggcgcc
ttcgacccgaccaccatgggcaccgtgcccaacgtcggcctgatggcccagaaggccgag
gaatacggttcgcacgacaagaccttcgaaatcgcgcaagccggcgtggcccgcatcgtc
accctggacggccaggtgctgctggagcagaacgtggaagaaggcgacatctggcgcatg
tgccaggtcaaggacgccgcggtccgtgactgggtcaagctggccgtgacccgtgcccgc
ctgtccgggatgccggccgtgttctggctggacccgtaccgtccgcacgaagccgaactg
atcaagaaggtcaacacctacctgaaggatcacgacctgactggtgccgacatccagatc
atgtcgcaagtacgtgccatgcgttacaccctggaacgcgtcatccgcggcctggacacc
atctcggtgaccggcaacatcctgcgcgactacctgaccgacctgttccccatcatggaa
ctgggcacctcggccaagatgctgtcgatcgtcccgctgatggccggtggcggcatgttt
gaaaccggtgccggcggttcggctccgaagcacgtgcaacagctggtcggtgaaaaccac
ctgcgctgggattcgctgggcgagttcctggccctggcggtgtctatcgaagaagtgggc
atcaagaccggcaacaacaaggccaagatcctggccaagaccctggacgcggccaccggc
aagctgctggacaacaacaagtcgccctcgcccaagaccggcgaactggacaaccgcggc
agccacttctacctggccctgtactgggcccaggaactggccgcacagaaggacgacgcc
gaactggccaagcagttcgccccgctggccaaggcactggctgacaatgagcagaagatt
gtcgaagagctgaactcggtgcagggcaagcaagtggatatcggcggttactacctgccg
gaccgcgagaagaccttcgccgtgatgcgtccgagcgccaccctgaaccaggcgctggaa
tcagtgtaa
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