Herbaspirillum rubrisubalbicans: Hrubri_2684
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Entry
Hrubri_2684 CDS
T04238
Name
(GenBank) aminodeoxychorismate lyase protein
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hrb01011
]
Hrubri_2684
Enzymes [BR:
hrb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Hrubri_2684
Peptidoglycan biosynthesis and degradation proteins [BR:
hrb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Hrubri_2684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
ALU89860
LinkDB
All DBs
Position
complement(3115075..3116055)
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AA seq
326 aa
AA seq
DB search
MKKLLATLFVLAALVAAAGVYWSKQPIVPPEGQVIAFTITPGAGVSGAAQQIAAAGVPVN
PDLFALYARLSGEGARIKAGSYEIKPGYTPQRLLLQLVRGEFAQEALTIIEGWTFKQMRK
AIAAQPSLKHDTSNWTDQQILAKLTTEYTYPEGLFFPDTYLFAKGASDMQVYKQAFTLMS
KKLNEAWARRDLSLPYRTPYEALIMASIVEKETGQKSERGMVAGVFINRLRTGMLLQTDP
TVIYGMGDRYQGKIHKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYF
VARGDGTSHFSSNLNEHNQAVNRYQR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttattggcaacattgttcgtgctggccgcactggtggccgccgcaggcgtg
tactggagcaagcagcccatcgtgccgcccgaaggccaggtgatcgccttcaccatcacg
cccggcgccggcgtctccggtgctgcccagcagatcgcggccgccggggtgccggtcaat
cccgatctctttgcgttgtatgcgcgcttgtccggcgagggggcccgcatcaaggccggc
agctacgagatcaaacctggatacacgccgcagcgcctgctgctgcaactggtgcgcggc
gaattcgcccaggaggcgctgaccatcattgaaggctggaccttcaagcagatgcgaaag
gccatcgccgcacagccttcgctcaagcacgacaccagcaactggaccgaccagcagatc
ctggccaagctgaccaccgagtatacctacccggaaggtctgttcttccccgacacctat
ctcttcgccaagggcgccagcgatatgcaggtctacaaacaggcttttacgctgatgagc
aagaagttgaatgaagcctgggcccggcgcgacctgtcgctgccgtatcgcacgccctat
gaagccttgatcatggcctccatcgtcgagaaggaaaccggccagaaatccgagcgcggc
atggtggccggggttttcatcaatcgcctgcgcacgggcatgttgctgcagaccgatccg
accgtgatctatggtatgggcgatcgctaccagggcaagatccacaaggtcgacctgttg
accgacacgccctacaacacctatacccgcgccggcctgccacccaccccgattgcattg
cccggcgccgcttcgttggcggcggcattgaaccccgacaagaccgaagccttatacttc
gtggcgcgcggggatggcaccagccatttctccagcaacctgaacgagcacaaccaggcc
gtcaaccgctaccagcgttga
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