Herbaspirillum rubrisubalbicans: Hrubri_2837
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Entry
Hrubri_2837 CDS
T04238
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase (Class II) protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hrubri_2837 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hrb01007
]
Hrubri_2837 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_2837 (lysS)
Enzymes [BR:
hrb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Hrubri_2837 (lysS)
Amino acid related enzymes [BR:
hrb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Hrubri_2837 (lysS)
Transfer RNA biogenesis [BR:
hrb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hrubri_2837 (lysS)
Prokaryotic type
Other AARSs
Hrubri_2837 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ALU90012
LinkDB
All DBs
Position
3288123..3289664
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AA seq
513 aa
AA seq
DB search
MTTQNTPAAQPAADENSIIAERRAKLAAIREQGIAFPNDFRPANKAADLHSQYDGFENEA
LEAEPVTVTVAGRMMLKRVMGKAAFATLQDASGARADGRIQLYVTKDVTGEDAMAAFKHY
DLGDILGAEGTLFKTKTGELSIKVTKLKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIM
SEETRRTFKARTAAMSSIRRFMESNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFM
RIAPELYLKRLVVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQ
VIRQAAIDAHGTAVLTYQGRELDLSKPFDRLTITGAILKYAPDYTEAQLADIDFLRTELK
KFGVKTDQAPLAGAGIGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDTVAGITE
RFELFITGREIANGFSELNDAEDQAARFHAQVAAKDAGDEEAMYYDADYIRALEYGMPPA
GGCGIGIDRLMMLITDSPNIRDVILFPHLRRED
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcaaaacacccccgccgcccagccggcagccgacgagaacagcatcatcgcc
gagcgccgcgccaagctggcggccatccgcgaacagggcatcgccttccccaacgatttc
cgtccggccaacaaggctgccgacttgcattcgcaatacgacggcttcgagaacgaagcc
ctggaagccgagccggtcaccgtcaccgtcgccggccgcatgatgttgaagcgggtcatg
ggcaaagcggccttcgccaccctgcaggatgcctcgggcgcacgcgccgatggccgcatc
cagctctacgttaccaaagacgtgaccggcgaagacgccatggccgccttcaagcactat
gacctgggcgatatcctgggtgccgaaggcacgctgttcaaaaccaagaccggcgagctg
tcgatcaaggtcaccaagctgaagctgatcaccaagtcgctgcgtccgctgccggacaag
ttccacggcctggccgaccaggaaatgaagtatcgccagcgctatgtcgacctgatcatg
agcgaagaaacccgccgcaccttcaaggcgcgtaccgccgcgatgtcgtcgatccgccgc
ttcatggaatccaacggcttcatggaagtagaaaccccgatgctgcacccgatcccgggc
ggcgcggcggccaagcccttcatcacccaccacaacgcgctggacatgcagatgttcatg
cgcatcgctcccgagctgtacctgaagcgcctggtggtgggcggcttcgagcgcgtcttc
gaggtgaaccgcaacttccgcaacgaaggtgtctcgccgcgtcacaatcctgaattcacg
atgatggagttctacgccgcctacgtggattaccaatggctgatgggcttcaccgaacag
gtgatccgccaggccgccatcgacgcccacggcactgccgtgctgacctaccagggtcgc
gagctggacctgtccaagcccttcgaccgcctgaccatcaccggcgcgatcctgaagtac
gcccccgactacaccgaggcgcaactggcagacatcgacttcctgcgcaccgaactgaag
aagttcggcgtcaagaccgaccaggccccgctggccggtgccggcatcggcgcactgcaa
ctggcgctgtttgaagaaactgctgaatcgcagctgtggaacccgacctacatcatcgac
tacccggtcgaagtctcgccgctggcgcgtgcttccgacacggtggccggtatcaccgag
cgctttgaactcttcattaccggccgcgagatcgccaacggcttctcggaattgaacgat
gccgaagaccaggccgcgcgcttccacgctcaggtagcggccaaggatgccggtgacgaa
gaagccatgtactacgacgccgactacatccgcgccctggaatatgggatgcccccggcc
ggcggctgcggcatcggcatcgatcgcctgatgatgctcatcaccgactcgcccaacatc
cgcgacgtcatcctgttcccgcacctgcgccgcgaagactga
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