Herbaspirillum rubrisubalbicans: Hrubri_2845
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Entry
Hrubri_2845 CDS
T04238
Name
(GenBank) TRAP-type C4-dicarboxylate-binding periplasmic protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hrubri_2845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_2845
Transporters [BR:
hrb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Hrubri_2845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ALU90020
LinkDB
All DBs
Position
complement(3295724..3296755)
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AA seq
343 aa
AA seq
DB search
MTIIPRRAALAACVFATLTLPLAAKVALAQSTIVIKFSHVVANDTPKGKGAERFKELAEK
ATNGRVKVEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAKEFEVFDLPYIFPN
KAVLKRVTEGPIGQGLFQRLESRGIKGLAYWDNGMKVMTANRPLHQVADFRALKMRIQSS
KVLDEQFRALKANPQVLAFSEVYQAMQTGVVDGSENTPSNIYTQKMYEVQSNLTVSDHGY
IGYAVIVNKKFWDALPADVRTQLEGAMKEATIYANNIAQKENDDALAAIKASGKTKVYTL
SEEEKTQWRRALLPVHKSMATRVGPELIEAIYKESEAAGVKMN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcccacggcgcgcggcattggccgcctgcgtctttgccacgctgaccttg
ccgctggcggccaaggtcgcgctggcccagtccaccatcgtcatcaagttcagccacgtg
gtggccaatgacacgcccaagggcaagggcgcggaacgcttcaaggaactggccgagaaa
gccaccaatggccgcgtcaaggtcgaggtctatcccaatagcacgctctacaaggacaag
gaagaactggaagccctgcaactgggttcggtgcagatgctggcgccttcgctggccaag
tttggaccgctgggggccaaggagttcgaggtgttcgacctgccttacatcttccccaac
aaggcggtcttgaagcgtgtcaccgaagggccgatcgggcagggcctgtttcagcgcctg
gaaagccggggcatcaagggcctggcctattgggataacggcatgaaggtgatgacggcc
aaccgtcccctgcaccaggtagccgacttccgggcgttgaagatgcgcatccagtcttcc
aaggtgctggacgaacagttccgggcgctcaaggccaatccgcaggtgctggcgttttcc
gaggtgtaccaggcgatgcagaccggggtggtcgatggcagcgagaacacaccctccaat
atctatacgcagaagatgtatgaggtgcagtccaacctgacggtgtccgatcatgggtat
atcggttacgcggtgatcgtcaacaagaagttctgggatgccttgccggcagatgtgcgc
acgcaactggaaggggcgatgaaggaagcgaccatctacgccaacaacatcgcccagaaa
gaaaacgacgatgcgctggccgccatcaaggccagcggcaagaccaaggtctataccttg
agcgaagaagagaagacccaatggcgccgcgcgctgctgccggtacacaagtccatggct
acgcgcgtggggcccgaattgatcgaggcgatctataaggaaagcgaggcggccggggtc
aagatgaattga
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