Herbaspirillum rubrisubalbicans: Hrubri_2858
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Entry
Hrubri_2858 CDS
T04238
Symbol
dnaB
Name
(GenBank) replicative DNA helicase protein
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hrubri_2858 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrb03032
]
Hrubri_2858 (dnaB)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Hrubri_2858 (dnaB)
DNA replication proteins [BR:
hrb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hrubri_2858 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
DUF7125
DUF6200
divDNAB
RecA_N
TIP49
Motif
Other DBs
NCBI-ProteinID:
ALU90032
LinkDB
All DBs
Position
complement(3309146..3310516)
Genome browser
AA seq
456 aa
AA seq
DB search
MNVPVQATPYAHEAEQSVLGALLLDNGAADRIGDLKAKHFYRADHQAIFAEAISLISKGE
PADVISIWERLQARGDVFDGELLPYIHRIAQNTPSSENVHHYASIVVEKALLRGLLHVTG
QVEELVRNPRGQSADQILEKVVGMVNSLAARRVRQEPTLLNELLVTLIEQVAERSEVGDN
AMPTGIASLDAQLNGGVRRGQLVIFAGRPSMGKTALAVDVGLNIAERHSALLFSMEMSSQ
EIAARALANRGGLSLSRILGRIDDADAQAWGAVTHGCSRLNQLRFAIDDTAAISLLELRL
RAKAWKRRHGLDLIVVDYLGLMTGGEGEKRHEQIGSYSRGLKALAKELDVTVLALAQLNR
KSEDRADRRPQLSDLRDSGEIEQDADVVVLIHRPEMHDPTNEALRGFAEALVRKQRNGAL
GDIPLKFKGATSRFEEWAGLIPTTTPQKSGWKGGYD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgccagtgcaagccactccctacgcccatgaggccgagcaatccgtcttgggc
gcgctgttgctcgacaacggtgcagcggaccgcatcggggatctgaaggcaaagcatttc
taccgcgcggaccatcaggcgatcttcgccgaggctatttcgctcatctcgaagggggag
cctgcagacgtaatctcgatttgggagcgtttgcaggcccgtggagacgtttttgacggc
gagctgctgccatacatccaccggatcgctcaaaacactcctagcagcgaaaacgttcac
cactatgcaagcatcgtggttgaaaaggcattgctgcgcgggctgcttcacgttaccggc
caggttgaggagctggtccgcaatccacgcggccagagcgcagatcagatcttggaaaag
gtggtcggcatggtcaattcgttggccgcccgccgcgttcgccaggagcccacgctgctc
aatgagctgctggtgacattgatcgagcaggttgctgaacgttccgaggttggagacaac
gcaatgccgacggggattgcttccctggatgctcagttgaatggcggagtgaggcgcggt
cagttggtgatcttcgcggggcgcccgagtatgggcaagacggccttggcggtcgatgtg
ggtttgaacatagctgagcgccacagtgcattgctgttcagcatggaaatgagctcccag
gaaattgcagccagggcactcgcgaatcgcggcggtttgtcgctgtcgcggatcctcggc
cggattgacgatgcggatgctcaggcatggggcgctgtaacgcatggctgcagcaggctc
aaccagctccgattcgccattgatgacactgcggccatcagcctgctcgaactgcgcttg
cgggcgaaggcatggaagcgccggcatgggctcgatctgatcgtcgtggattacctcggg
ctcatgaccggtggcgagggcgagaagcggcatgagcaaatcggctcctactcacgcgga
ctgaaggcactggccaaggaattggatgtgaccgttctggcactcgcgcagctcaatcgc
aagtccgaggaccgcgcagaccggcgtccccagctctccgatttgcgggattccggcgaa
atcgaacaagacgccgatgtcgtggtgctgatccatcgtcccgaaatgcacgatccgacc
aacgaggccttgcgcgggtttgctgaggccttggtgcgcaagcagcgtaatggcgcgctg
ggcgatatccctttgaaattcaagggtgctacttcgcgcttcgaggaatgggcggggctt
atccccactacaacaccgcagaagagcggatggaagggcggctatgactag
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