Herbaspirillum rubrisubalbicans: Hrubri_2903
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Entry
Hrubri_2903 CDS
T04238
Symbol
cyaB
Name
(GenBank) ABC-type bacteriocin/lantibiotic (cyclolysin-type) secretion transporter protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_2903 (cyaB)
03070 Bacterial secretion system
Hrubri_2903 (cyaB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_2903 (cyaB)
02044 Secretion system [BR:
hrb02044
]
Hrubri_2903 (cyaB)
Transporters [BR:
hrb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Hrubri_2903 (cyaB)
Secretion system [BR:
hrb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Hrubri_2903 (cyaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_18
AAA_29
NB-ARC
AAA_16
MeaB
AAA_22
RsgA_GTPase
PRK
nSTAND3
DUF87
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ALU90075
LinkDB
All DBs
Position
complement(3362339..3364519)
Genome browser
AA seq
726 aa
AA seq
DB search
MNQTDNDPDQTGTDSGLLCLIMLARLHGIAADAQQLQHRFGRQPFDVQTILLGARTLGMK
ARCIRQRPGRLEHTPLPAIGIDHAGRFFVLAKLDVATGQDNAPVRILIQQPGQPPQVMSR
DEFTAFWCGQVILVTSQATYSGESARFDFSWFIPAVVKYRKVLGEVLLISLVLQIIGLVT
PLFFQVVMDKVLVNHAMMTLNVIAVGLIAATLFEALLAGIRTAIFAKASSKIDVELGARL
FSHLLSLPLAYFQVRRAGDSIARVRELENIRSFLTSNAMTLVLDLVFSFIFLAVMLWYSV
PLSLIVLASIPVYLLLSLIFTPMLRSRLNDKFNKSAENQSFLVETLTGMDTVKAMAVEPH
WQKKWDQQLAGYVAAGLTTTNISLLASGSVSLVSKLVGVGIMWMGALQVVDNQLSVGELV
AFNMLAGQVAAPILRLAQLWNDFQQVGISMSRLADVLDARSEVAGQRTRLPRVSGAIAFE
RVNFRYRPEAPEVIRALSLQIQPGEVIGIVGRSGSGKSTLAKLVQRLYVCESGRISVDGQ
DIAIIDTASLRQQIGVVLQENTLFSRSIRDNIALVDPAAPIEEVIAAAKLAGAHDFICEL
PEGYDTLVGEQGCGLSGGQRQRIAIARALITNPGILIFDEATSALDYESEKIIQDNMRQI
CAGRTVLIIAHRLTAVREADRILVMERGNVVESGRHEELLRLRGGIYAHLHALQAGQPAA
AQGGKS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaccgacaatgatcccgatcagaccgggaccgacagtggcctgctatgcctg
atcatgttggctaggctgcatggcatcgccgctgatgcccagcaattgcagcatcgcttc
ggccgccagcccttcgacgtacagaccatcctgctgggcgcacgcacgctgggcatgaag
gcccgttgcatccgccagcggcccgggcggctggaacacacacccttgccggccatcggc
atcgatcatgccgggcgctttttcgtgctggccaagctcgatgtggcaaccggccaggac
aatgcccctgtgcgcatcctgatccagcagccggggcagccgccgcaggtgatgtcgcgg
gatgaatttaccgccttctggtgtggccaggtgatcctggtgaccagccaggccacctac
tcaggagagtcggcgcgctttgacttcagctggttcatcccggccgtggtcaagtaccgc
aaggtgctgggcgaggtcttgctgatctcgctggtgctgcagatcatcggactggtgacg
cccttgttcttccaggtggtgatggacaaggtattggtcaatcacgccatgatgaccttg
aacgtgatcgccgtcggcctgattgcggcgacgctgttcgaagcgctgctggccggcatt
cgtaccgccatcttcgccaaggccagcagcaagatcgacgtcgaactgggcgcgcgcctg
ttttcccatctgttgagcctgccgctggcctacttccaggtgcgccgtgcgggcgattcg
attgcccgcgtgcgcgagctggaaaacatccgcagcttcctcaccagcaatgccatgacg
ctggtgctggacttggtgttttccttcatcttcctggcggtgatgctttggtacagcgtt
cccttgagcctgatcgtgctggcttccatcccggtctatctgctgctgtcgctgatcttc
acacccatgctgcgctcgcgcctcaacgacaagttcaacaagagcgccgagaaccagtcc
ttcctggtcgagaccctgaccggcatggataccgtcaaggccatggcagtggagccgcac
tggcagaagaagtgggaccagcaactggccggctatgtggcggcgggcctgaccaccacc
aacatcagcctgttggccagcggcagcgtgagcctggtcagcaagctggtgggcgtgggc
atcatgtggatgggagcgctgcaggtggtggacaaccagctctcggtgggcgagctggtg
gccttcaacatgctggccgggcaggtggccgcaccgatcctgcggctggcgcagttgtgg
aacgatttccagcaggtcggcatttccatgagccggctggccgatgtgctcgatgcccgc
agcgaggtggctggtcaacgcacgcgcttgccgcgggtgagcggggcgattgcctttgag
cgggtgaatttccgctatcgtcccgaagcacccgaggtcattcgcgcactgtcgctgcag
atccagccgggcgaggtgatcggcatcgtcggtcgctccggttccggcaagagcaccctg
gccaagctggtgcagcggctctacgtgtgcgagagcgggcgcatcagcgtcgacgggcag
gatatcgccatcatcgataccgcctcgctgcgccagcagatcggtgtggtgctgcaggaa
aatacgctgttctcgcgctccattcgcgacaacatcgccctggtcgatccagccgcaccc
atcgaagaagtcattgccgcagccaagctggccggcgcccatgatttcatctgcgagctg
cccgagggatacgacaccctggtgggcgagcagggctgcgggctctccggtggccagcgt
cagcgcatcgccatcgcccgcgcactcatcaccaatccgggcattctgatcttcgacgaa
gccaccagcgccctggactatgaatccgaaaaaatcatccaggacaacatgcgccagatc
tgcgccggtcgcaccgtgctcatcattgcccatcgcttgacggcggtgcgcgaagccgac
cgcatcctggtcatggagcgtggcaacgtggtcgaaagtggccgccatgaagaactgctt
cgcctgcgcggtggtatctacgcgcatctgcacgcgctgcaggcgggccagccggcagcc
gctcaaggggggaaatcatga
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