Herbaspirillum rubrisubalbicans: Hrubri_2904
Help
Entry
Hrubri_2904 CDS
T04238
Name
(GenBank) hemolysin-type calcium binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
RTX_C
Motif
Other DBs
NCBI-ProteinID:
ALU90076
LinkDB
All DBs
Position
complement(3364637..3367975)
Genome browser
AA seq
1112 aa
AA seq
DB search
MTITIAPNRMTALASAPSARTTSSSSTRKADAASVTSTTRVTSTSAVAVDGITSTDAFDG
GKYSLAEGRASSLAPSHHARSQRRDQAQRSHPQRTEAGSGPAPQPPLVMASSSADLADAA
QLSQAVVSQHTAAQDLLAATVNEQAARVDVLAPMDQGVLQLLSSAPSAAASASSATVTPG
PQPILPALPSLTPAVAAAPPQPVPCPPSTPSAPATSCPSPTPYQAPCWTTDLVPLAEAFP
PDVQITLSDCVPVPVSSLVPSKDVPGFASVPVPKPAPAVTPVVPPKPAPSSAPVPAVAPA
VSLAVTPSLYVAPPAAVYVPAPEEPAIPDSNFRSLRDDDNAFHLNGGRTINFAPNQIKAL
NSQPGCLIGTDGNDLLDPNLGTSNYNVNVQAGPFRQLAGGGGDDVINGSKGDDILWGGDG
KDLLWGKEGDDQLYGENGDDQLVGAEGNDLLSGGAGADRIFAGLGNDRIWGGDGDDDLYG
NDLKAGVTKGLEPGQTDDDQIVGGAGNDSISGGLGNDQLWGGIGNDSLYGEEGDDKLDGE
AGNDRLYGGAGNDVLQGGDGDDVLYGDYMRAYAAATNDIGGDDLIYGGAGNDSLYGSVGN
DLLDGGSGNDYLEGGKGDDTYLVDCSGDTVVENANEGHDTVVASCSLTLATHVEDLHLAE
GGNFNGSGNTLNNLITGNSQDNLLDGGQGADTLIGGKGNDTYVVDDIGDKVVEQAGEGID
SVQSKISYTLGDNLENLSLMDSTSAQAQTINGKAALVYGFPHNYDLDYSQGDEVPGYKGT
CGETSVANICIMSGLQETEADVVKRAIANGWCRTQAATDETRGGCNQYDQMNLLKSFGLP
SDCSYGYDQAKLAGLLKDGRGVLIAVNAGKLWDDPDYVQGGVLNHVVTVTGVACDASSGD
VLGFYIADSGRGQTADANRYLSADDMRKVADAYGANMVYTLDPIKIRNENIDATGNALDN
VLTGNRGNNILTGGRGDDTLIGGAGNDTYVFTRGDGRDQIIDNDTTRGNQDVLQFKDAKQ
TNLWFSQAGQDLQIDVLGSSDRVTVKDWYVGGKSGTDRHVERIKTADGATLYDSDVEQLV
QAMASFAPPAALQTEWTSGQTSAGKVLLTVTH
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaccattgcccccaatcgaatgactgcgctggcctctgcgccttcggccagg
accacatcgtcaagcagcacacgcaaggccgatgcagccagcgtgaccagcaccacccgc
gtgaccagcacgtcagccgtggcagtggatggcatcacgtccaccgatgcctttgacggc
ggcaagtactccctggccgagggcagggccagcagtctggcaccttcgcaccatgcacgt
agccagcgacgcgaccaggcacagcgctcgcacccgcagcgcaccgaggccgggagcggg
ccggccccgcagccgccgctggtgatggccagtagctccgccgacctcgccgatgccgcc
cagctatcccaggcggtcgtgagccagcacaccgcagcacaagacttgcttgccgccacc
gtgaacgagcaagctgcgcgcgtggatgtccttgcacccatggatcagggcgtgctgcag
ttactctccagcgcgccatcggctgccgcgtcggcatcctcggcgacagtcacgcctggt
ccgcagccgatattgccggcactgccgagcctcacgcctgcggttgctgccgcgccgccg
cagcctgtgccctgtccaccgtcgacaccctcagcgcctgcgacatcctgcccatccccc
actccgtaccaggcgccctgctggaccaccgacctggtgccgctggccgaggcctttcca
cctgacgtgcaaatcaccttgtcggattgcgtaccggtgccggtgtcttcgctggtgcca
tccaaggacgtgccgggcttcgcttcggtgccggtaccgaagccggcgcctgccgtgacg
cccgttgtcccacccaagcctgcccccagttctgccccagtgcctgccgttgctcctgcc
gtctcccttgcggtgacgccgtcgctctacgtcgcgccgcccgctgcagtctatgtgccg
gcaccggaggagccagccatcccggacagcaatttccgcagcctgcgcgacgacgacaac
gcttttcatctcaacggcggccgcacgatcaacttcgcccccaaccagatcaaggcgctc
aacagccagccgggctgcctgatcggcaccgatggcaatgacctgctcgatcccaacctc
ggcacctccaactacaacgtcaacgtccaggccgggcccttcagacaattggccggtggc
ggcggtgacgatgtgatcaatggcagcaagggggacgacatcctctggggtggcgacggc
aaggatctcctgtggggaaaggaaggggatgaccagctttatggtgagaacggcgacgac
cagttggtaggcgcagaaggtaacgatctcctctcgggtggcgccggcgccgaccgcatt
tttgccggtctgggcaatgaccgcatctggggtggcgatggcgatgacgacctgtacggt
aatgacctgaaagccggcgtgaccaaggggctggaaccgggccagaccgatgatgaccag
atcgtcggtggcgccggcaacgacagtatctccggcggactgggcaacgaccagctatgg
ggtggcatcggcaacgacagcctctatggcgaggagggcgacgacaagctcgatggcgag
gcgggtaatgaccgtctctacggcggcgccggtaacgatgtgctgcagggcggcgatggc
gatgacgtcctctatggcgactacatgcgcgcctatgccgccgcgaccaacgatatcggg
ggtgacgacctgatctatggcggggccggcaacgactctctctatggcagcgtgggcaat
gatttgctcgacggtggcagcggcaacgactacctggaaggcggcaagggcgatgacacc
tatctggtcgactgtagcggcgacaccgtggtcgaaaacgccaatgaaggccacgacacg
gttgttgcttcttgcagtcttacccttgctacccacgtcgaagacctgcacttggccgaa
ggcggcaacttcaacggcagcggcaatacccttaacaacctgatcaccggcaacagccag
gacaacctgctcgacggcggccagggtgccgacaccctgatcggcggcaagggcaacgat
acctatgtggtcgatgacatcggcgacaaggtggtagaacaggccggggaaggcatcgat
agcgtccagtccaagatcagctacaccctgggtgacaatctggaaaatctgagcctgatg
gatagcaccagcgcccaagcccagaccatcaacggcaaggcggcactggtgtacgggttc
ccgcacaactatgacctggactattcgcagggcgacgaggtgcccggttacaagggcacc
tgtggcgagaccagcgtggccaacatctgcatcatgtcgggcctgcaggagaccgaggcc
gatgtggtcaagcgcgccatcgccaatggctggtgtcgtacgcaggccgccaccgatgag
acgcgcgggggctgcaatcagtacgatcagatgaacctgctcaagagcttcggtctgccc
tccgactgcagctatggctacgatcaggccaagctggccggcttgctcaaggatggccgt
ggcgtcctgattgccgtcaacgccggcaagctgtgggacgatccggattacgtccagggc
ggtgtcctcaaccacgtggttaccgtcaccggagtggcgtgcgatgccagcagcggtgac
gtgctcggcttctatatcgccgactcaggacgcggccagactgccgatgccaaccgctac
ctgtcggctgacgacatgcgcaaggtagccgacgcctacggcgccaacatggtctacacc
ctggacccgatcaagatccgcaacgagaacatcgatgccaccggcaatgcgctggacaat
gtcctcacgggaaaccgcggcaacaacatcctcaccggcggccgcggtgacgacaccttg
atcggtggcgccggcaacgatacctacgtcttcacccgcggcgatgggcgcgaccagatc
atcgacaacgacaccacccgcggcaaccaggacgtgctgcagttcaaggacgccaagcag
accaatctctggttcagccaggccggccaggatctgcagatcgacgtgctgggcagcagc
gaccgcgtgaccgtcaaggactggtacgtgggcggcaagagtggcaccgaccgtcatgtc
gagcgcatcaagaccgctgacggcgccaccctctacgacagcgatgtggagcaactggtg
caggccatggccagcttcgcgccgcctgcggccttacagaccgagtggaccagcggccag
accagcgccggcaaggtcttgctgaccgtgacccactaa
DBGET
integrated database retrieval system
