Herbaspirillum rubrisubalbicans: Hrubri_2938
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Entry
Hrubri_2938 CDS
T04238
Name
(GenBank) methyl-accepting chemotaxis transducer transmembrane I protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02020
Two-component system
hrb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hrubri_2938
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hrubri_2938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hrb02035
]
Hrubri_2938
Bacterial motility proteins [BR:
hrb02035
]
Flagellar system
Chemotaxis proteins
MCPs
Hrubri_2938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
COG6_N
ApoLp-III
Syntaxin
Motif
Other DBs
NCBI-ProteinID:
ALU90108
LinkDB
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Position
complement(3411511..3413130)
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AA seq
539 aa
AA seq
DB search
MTIAKKLYLLISAVILSLCALTALSIYQSHRVSDAASYSTQNTVPSILTLDQAIESVYAI
RLNVARYFIEPTTREKIFPILEVLHEKTQAAFLKYEKECISDAKDEKLLEQDRVAFAAYE
KARHQTLALVGTGQPSELQRAREELLVPAGNRLMKALTEHKQYNEQLGRQEMDNAASILQ
SSIVITASVSLLIGALVAGASLLLVRLIVSSLRHATHVADAISRYDLTSKIDHAAHDEIG
HLIQALKRMNDSLCKIIGSVGDSTSTIQVAAGEIASGNLDLSSRTEAQAGSLEETVTAMG
QLTATVRQNADNAHQANELAASASAIASQAGDVVNEVVVTMDAIHASSLKIVGIISVIDG
IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAREIKELIDDSVHKVGT
GSHLVAEAGNSMEKVVHSVRRVTDIVGEISSASSEQSAGIEQIHQAIGAMDDATQQNAAL
VEQAAAASQSLQEQAAHLVEAVGVFRLNRQAQWIAEGGQIQAPREAPAIAQSGALALPA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgccaagaagctgtaccttctcatcagcgccgtcattctgagcctgtgcgcc
ctgacggcgttgagcatctaccagagccaccgggtgtcggatgcagccagctattcgacc
cagaataccgtccccagcatcctcacgctggatcaggcgattgagtcggtgtacgcgata
cggctgaacgtggcgcgctacttcatcgagcccacgacccgcgaaaagatcttccctatc
cttgaggtgctgcatgaaaagacgcaggccgccttcctcaagtacgagaaagaatgcatc
tccgacgcgaaagacgaaaagttgctggagcaggaccgtgttgcctttgccgcttacgag
aaggcgcggcaccagaccttggccttggtcgggaccgggcagccgtctgaactgcagcgg
gcgcgggaagagctgctggtgccagccggcaaccgattgatgaaagccctgaccgagcac
aagcagtacaacgaacagttgggccgccaggagatggacaatgccgcttccatcctgcag
tcgtccatcgtcatcaccgccagcgtcagccttctgatcggtgcactggtggcgggagcg
agcctgctgctggtgcgtttgatcgtgtcgtccctgcgccacgccacacacgtggccgat
gccatttcccgctacgacctgaccagcaagatcgatcacgccgcgcatgatgaaatcggc
catctgatccaggcactcaagcgcatgaacgacagcctgtgcaagatcatcggcagcgtc
ggtgacagcaccagcaccatccaggtggccgctggtgaaattgccagcggcaatctcgac
ctgtcttctcgcacggaagcgcaggccggttccctggaagagactgtcaccgccatgggc
caactcactgccaccgtgcgccagaacgccgacaacgcccaccaggccaacgagctggcc
gcatcggcctcggccatcgccagccaggctggtgacgtggtcaacgaagtggtggtgacg
atggatgccatccatgcctcttcgctcaagatcgtgggcatcatcagcgtgattgacggc
attgccttccagaccaacatcctggccttgaacgccgcagtggaagcagcgcgtgccggc
gagcaggggcgcggttttgcggtggtggcgtcggaggtgcgatccctggcccagcgttct
gctgcagccgctcgggaaatcaaggaattgatcgacgattccgtccacaaggtcggcacc
ggtagccatctggtcgccgaggcgggcaacagcatggagaaagtggtgcacagcgtgcgc
cgtgtcaccgacatcgttggcgagatcagctcggccagcagcgagcagagcgcgggcatc
gagcagatccatcaagccattggtgcgatggacgatgccacccagcagaatgcggcactg
gtcgagcaggccgcagccgcctcgcagtcattgcaggagcaggcggcgcatctggtggaa
gcggtaggggtgttcaggttgaatcgtcaggcgcaatggatcgctgaaggtggccagatt
caggcgccgcgagaggcgcccgccattgcgcaaagcggggcattggcgctgccggcctga
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