Herbaspirillum rubrisubalbicans: Hrubri_2952
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Entry
Hrubri_2952 CDS
T04238
Name
(GenBank) ABC-type amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_2952
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_2952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_2952
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hrubri_2952
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ALU90122
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Position
3432518..3433675
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AA seq
385 aa
AA seq
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MQFNTMLKTIPALLIGAALSQAALAADIKLGVAEALTGPAAKYGVAIKNGFTLASEEINA
KGGVNGDKLALVIEDEQGKKEEAINVFKKLIFQDKVLAVFGPTLSNSAFAADPIANASKV
VVFGTSNTADGITAMGPFTFRNSVMEADVLPVTVKAAVKHFGIKKVAVIYGNDDAFTKSG
YDVFKATLEQQKIPVTTTEAYAKGDVDFKAQLTKIKAGNPDAIVCSCLAEEAANIILQTR
ALGMKQPFIGGNGLNSPKLFEIAKDAGDNTLMGSPWSAENQTPANKAFIAAYKAKFGSDP
DQFAAQAYDAMYIVADALKTVKLSGNLAKDRDALRAALPAVKIDGATGKFAFRPAPAVAG
KQVGFDADQEAIVNIAKGGKFVLLK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaataccatgctcaagaccattccggccctgctgatcggtgccgccctgtcg
caggcggcccttgccgccgacatcaagctgggtgtggccgaagcgctgaccggcccggcc
gccaagtatggcgtggccatcaagaacggcttcacgctggcttccgaagaaatcaatgcc
aagggcggcgtcaacggcgacaagctggccctggtgatcgaagacgaacaaggcaagaag
gaagaagccatcaacgtcttcaagaaactgatcttccaggacaaggtactggcggtgttc
ggccccaccctgtccaactcggccttcgccgccgacccgatcgccaatgcctccaaggtg
gtggtgttcggcaccagcaataccgctgacggcatcactgccatgggccccttcaccttc
cgcaattccgtgatggaagccgacgtgctgccggtcaccgtgaaggccgccgtgaagcac
ttcggcatcaagaaggtcgccgtgatctatggtaacgacgacgccttcaccaagtccggt
tacgacgtcttcaaggccaccctggaacagcagaagatccccgtcaccaccaccgaggcc
tatgccaagggtgacgtcgacttcaaggcccaactgaccaagatcaaggccggcaacccg
gacgccatcgtctgctcctgcctggctgaagaagccgccaacatcatcctgcaaacccgc
gcgctgggcatgaagcagcccttcatcggcggcaacggcctgaactcgcccaagctgttc
gagatcgccaaggatgccggcgacaacaccttgatgggcagcccctggtcggccgagaac
cagaccccggccaacaaggcgttcattgccgcctacaaggccaagttcggttccgacccc
gaccagttcgccgcccaagcctatgacgccatgtacatcgtggccgatgcgctcaagacc
gtgaagctgtcgggcaacctggccaaggaccgtgacgccctgcgcgctgccctgccggcc
gtgaagatcgacggcgccaccggcaagttcgccttccgtcccgcaccggcagtggctggc
aagcaggtcggcttcgatgccgaccaggaagccatcgtcaacatcgccaagggcggcaag
ttcgtcctgctgaagtaa
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