Herbaspirillum rubrisubalbicans: Hrubri_2997
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Entry
Hrubri_2997 CDS
T04238
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00020
Citrate cycle (TCA cycle)
hrb00190
Oxidative phosphorylation
hrb00650
Butanoate metabolism
hrb00720
Other carbon fixation pathways
hrb01100
Metabolic pathways
hrb01110
Biosynthesis of secondary metabolites
hrb01120
Microbial metabolism in diverse environments
hrb01200
Carbon metabolism
Module
hrb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hrb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hrb_M00149
Succinate dehydrogenase, prokaryotes
hrb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Hrubri_2997 (sdhA)
00650 Butanoate metabolism
Hrubri_2997 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Hrubri_2997 (sdhA)
00720 Other carbon fixation pathways
Hrubri_2997 (sdhA)
Enzymes [BR:
hrb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Hrubri_2997 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GIDA
Pyr_redox_3
NAD_binding_7
FKS1_dom1
Motif
Other DBs
NCBI-ProteinID:
ALU90166
LinkDB
All DBs
Position
complement(3488204..3489982)
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AA seq
592 aa
AA seq
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MAAIKSAITTRRFDAVIVGAGGSGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWYWHMFDTVKGSDYLGDQDAIEFMCREAPKAVYELEHFGMPFDRNPDGTIY
QRPFGGHTANLGEKPVQRACAAADRTGHALLHTLYQRNVRAKTHFFVEWMALDLIRNEEG
DVLGVVALEMETGEIMMLHAKTTLFATGGAGRIWAASTNAFINTGDGMGMAARAGLPLQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGVGPHKDHVLLDLRHIGADTIKKRLPSILEIAHKFANVDATKEPIPVVPTIHYQ
MGGIPTNVHGQVVAPKGGSMKEVVQGMYAIGECACVSVHGANRLGTNSLLDLVVFGRAAG
NHIVGTRLQDQSHKPIPAGALDRSLERIAHLESSTGSERVQDVANDIRATMQKYCGVFRT
DALLQEGYKKIMELDERRKHVSFKDKSKVFNTARVEALELDNLIETAKATITSAAARKES
RGAHAHSDYEQRDDVNWLKHTLWFSEGNRLDYKPVNMQPLTVETFKPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcaatcaaatccgccatcactacccgccgctttgacgcggtcatcgtcggcgcc
ggtggctccggtatgcgcgcctcgctgcaactggccgaagccggcctgaacgtcgctgtc
ctgtccaaggtcttcccgacccgctcgcacaccgtggctgcccaaggcggcatcggcgct
tcgctgggcaatatgtccgaagacaactggtactggcacatgttcgataccgtcaagggt
tcggactacctgggcgaccaggacgccatcgaattcatgtgccgcgaagcaccgaaggcc
gtctacgagctggaacacttcggtatgcccttcgaccgcaacccggatggcaccatctac
cagcgtccgttcggtggtcacaccgccaacctgggcgaaaagccggtgcagcgtgcctgt
gccgccgctgaccgtaccggtcacgcgctgctgcacaccctgtaccagcgtaacgtgcgc
gccaagacccacttcttcgtcgaatggatggcgctggacctgatccgcaacgaagagggc
gatgtcctcggcgtggtcgcgctggaaatggaaaccggcgaaatcatgatgctgcacgcc
aagaccaccctgttcgccaccggcggtgcaggtcgtatctgggccgcctcgaccaatgcc
ttcatcaataccggcgacggtatgggcatggccgcgcgtgccggcctgccgctgcaggac
atggaattctggcagttccaccccaccggcgtggccggcgcgggcgtgctgatcaccgaa
ggcgtgcgcggcgaaggcggcatcctgatcaacagcaacggcgaacgcttcatggagcgc
tacgcgccgaccctgaaggatctggccccgcgtgacttcgtttcgcgttcgatggaccag
gaaatcaaggaaggccgtggcgtcggtccccacaaggatcacgtgctgctggatctgcgc
cacatcggtgccgataccatcaagaagcgcctgccctcgatcctggaaatcgcccacaag
ttcgccaacgtcgatgcgaccaaggaaccgatcccggtcgtgccgaccatccactaccag
atgggtggcatccccaccaacgtccatggtcaggtggtcgcacccaagggtggttcgatg
aaggaagtggtgcagggcatgtacgccatcggcgaatgcgcctgcgtgtcggtgcacggc
gccaaccgcctgggcaccaactcgctgctggacctggtggtgttcggtcgcgccgccggc
aaccacatcgtcggcacccgtctgcaggaccagagccacaagccgatcccggctggcgcc
ctggaccgttcgctggagcgcattgcgcacctggaaagcagcaccggttccgagcgcgtg
caagacgtggccaacgacatccgtgccaccatgcagaagtactgcggcgtgttccgtacc
gacgccctgctgcaggaaggctacaagaagatcatggagctggacgagcgccgcaagcac
gtctcgttcaaggacaagtccaaggtgttcaacactgcccgcgtggaagcgctggaactg
gacaatctgatcgaaaccgccaaggccaccatcacctcggccgcagctcgcaaggaatcg
cgtggcgcccacgcccacagcgactacgagcaacgcgacgacgtgaactggctcaagcac
acgctgtggttctccgaggggaatcgtctcgactacaagccggtcaacatgcagccgctg
accgtcgagaccttcaaacctaaagcacgtactttctaa
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