Herbaspirillum rubrisubalbicans: Hrubri_3174
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Entry
Hrubri_3174 CDS
T04238
Symbol
selD
Name
(GenBank) selenophosphate synthase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00450
Selenocompound metabolism
hrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Hrubri_3174 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_3174 (selD)
Enzymes [BR:
hrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
Hrubri_3174 (selD)
Transfer RNA biogenesis [BR:
hrb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Hrubri_3174 (selD)
Prokaryotic type
Hrubri_3174 (selD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
ALU90337
UniProt:
A0A0U3K6T7
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All DBs
Position
complement(3705583..3706617)
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AA seq
344 aa
AA seq
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MSDPIRLTQYSHGAGCGCKISPQVLEVILAGSGAQHLDPKLWVGNASRDDAAVYAIDEER
GVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNVLPPEVAREV
VRGGRAACDAAGIPLAGGHSIDAPEPIFGLAVTGVVEKRHMKRNDTASAGCLLYLTKPLG
IGILTTAEKKGKLRPDDVGVARDWMCQLNQPGSRFGKLAGVAAMTDVTGFGLLGHLVEMC
EGSGVSARIQHALVPSLPGVPYYLAEGCVPGGTGRNFESYGSKISPLSESQKHLLCDPQT
SGGLLVAVRPEANPEFLATAAALGLELAPIGELVERQRYAVEVL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccccattcgtttgacccagtacagccatggcgccggttgcggttgcaagatt
tcgccgcaggtgctggaggtgatcctcgccggcagcggtgcccagcatctcgatcccaag
ctgtgggtcggcaatgcttcccgtgacgacgcggcggtctatgccatcgacgaagaacgc
ggcgtggtctcgaccaccgatttcttcatgcccatcgtcgatgatcctttcgacttcggg
cgcatcgccgccaccaatgccatcagcgatatctacgccatgggcggcgacccgctgatg
gccatcgccatcctcggctggccggtcaacgtgttgccacccgaagtggcgcgcgaggtg
gtgcgcggtgggcgtgcggcctgcgacgcggccggcatcccactggccggtggccattcc
atcgatgccccggagccgatcttcggcctggccgtgaccggcgtggtcgagaagcgccac
atgaagcgcaacgataccgccagcgccggctgcctgctctatctcaccaagccgctgggc
atcggcatcctgaccaccgccgagaagaagggcaagttgcgtcccgacgacgtgggcgtg
gcgcgcgactggatgtgccagctcaatcagcccggtagccgcttcggcaagttggcgggc
gtagccgccatgacggatgtgaccggcttcggcctgctgggtcacctggttgagatgtgc
gaaggcagcggcgtgagcgcccgtatccagcacgcgctggtgcccagcctgccgggcgtg
ccgtattacctggccgaaggctgtgtgccgggcggtaccgggcgcaacttcgagagctat
ggcagcaagatcagccccttgagcgagagccagaagcacctgctatgcgacccgcagacc
agcggcggcttgctggtggctgtgcggcccgaggccaacccggaattcctcgccaccgct
gctgccctcggcctggaactggcgcccatcggcgaactggtggaacgacagcgctacgcg
gtcgaggtgctctga
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