Herbaspirillum rubrisubalbicans: Hrubri_3188
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Entry
Hrubri_3188 CDS
T04238
Name
(GenBank) ABC-type antimicrobial peptide transport system, permease component protein
KO
K02004
putative ABC transport system permease protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_3188
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
Hrubri_3188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
FtsX
Motif
Other DBs
NCBI-ProteinID:
ALU90349
LinkDB
All DBs
Position
3720591..3721859
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AA seq
422 aa
AA seq
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MKLLLRLAARSAWNRRFTLGLMLLAIALSTTMLLGIERVRHEVRSGFSQSVSGTDLVVGA
RTSPIQLMLYAIFRIGGATNNMGWDSAQTLARDPAVAWTIPISLGDSHRGFPVLATNGDY
FTHFRYGSNQALKLAQGRPFSDVFEAVLGADVAEKLHYRLGDIIILSHGMGGMGLTQHAD
KPFTVVGILARTGTPVDRTVHIGLDGMQAIHLDWEGGAPMPGVHIPAQFVKKFNLTPTSI
TAVLVGLKSRARVFAVQRAIADGDGYKEPLMAVLPGVALDQLWDVVGIGENALLVVSGMV
VVVGLAGLVAAILASLGERRRELAILRSVGARPLDVLLLLCVEGLGVMLSGVLAGLVLLS
VLVWALGPWLAAQFGIALQPTWPAAGELQLLLWTVLAGLVASLLPAWRAYRLSLSDGLTP
RT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgctacgcctggctgcgcgcagtgcctggaaccggcgtttcacgctgggc
ctgatgctgctggccatcgccctgtccaccaccatgctgctgggcatcgagcgggtgcgc
catgaagtgcgctccggcttttcgcaatcggtgtccggcactgacctggtggtgggggcc
cgcaccagtccgatccagttgatgctctatgccatcttccgcatcggcggcgccaccaac
aacatgggttgggacagcgcccagaccctggcgcgcgatccggccgtggcctggaccatt
ccgatttcgctgggcgactcgcatcgcggcttcccggtgctggccaccaatggcgactat
ttcacccacttccgctacggcagcaaccaggcgctcaagctggcccagggccggcctttc
agtgatgtcttcgaagccgtgctgggggcggacgtggccgagaagctgcattaccggctg
ggtgacatcatcatcctctcgcatggcatgggtggcatgggcctgacccaacatgccgac
aaacccttcacggtagtcggcatcctggcgcgtaccggcaccccggtggaccgcacggtg
catatcggcctggacggtatgcaagccatccacctcgactgggaaggcggcgcaccgatg
ccgggcgtgcatattccggcccagttcgtgaagaaattcaacctcaccccgactagcatc
accgccgtgctggtaggcttgaagagccgcgcccgggtctttgccgtgcagcgcgccatc
gccgatggcgacggctacaaggaaccgctcatggcggtgctgccgggggtggcgctggat
cagttgtgggatgtggtgggcatcggcgagaacgccttgctggtggtgtccggcatggtg
gtggtggtcggcctggccgggctggtggcggcgatcctggccagtctgggcgaacggcgg
cgcgagctggccatcctgcgctcggtcggggcgcgcccgctggatgtgttgctgttgctg
tgcgtggagggcttgggcgtgatgctctcgggcgtgctggccgggctggtgttgttgagc
gtgctggtgtgggccttgggcccctggctggccgcgcagttcggcattgccttgcagccg
acgtggccggccgcaggcgaattacaattgctgctctggaccgtgctggccgggttggtg
gccagcctcttgccggcctggcgcgcctatcgcctgagcctgtcggacggtctgacgccg
cgaacctga
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