Herbaspirillum rubrisubalbicans: Hrubri_3310
Help
Entry
Hrubri_3310 CDS
T04238
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_3310 (truA)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Hrubri_3310 (truA)
Transfer RNA biogenesis [BR:
hrb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrubri_3310 (truA)
Prokaryotic type
Hrubri_3310 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Med15_N
Motif
Other DBs
NCBI-ProteinID:
ALU90470
LinkDB
All DBs
Position
complement(3863185..3864081)
Genome browser
AA seq
298 aa
AA seq
DB search
MTELSSPIDGLRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTTSIATTCAGR
TDSGVHALEQVVHFDTAIARDRFSWVRGTNAFLPPTIAVRWACELPWVDDAAIAGAQAAE
LHGAEREGAESLAQFGFHARFSAIARTYHYVLYNHAVRSPLLAGKAGWTFRPLDADRMHR
AAQHLIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGS
LVVVGSGKQGPEWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQEMRSWPWL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactttcttccccgattgacggcctgcgccgcgtggtgctgggcgtgcaatac
gatggcgccagttggcaaggctggcagacccagccgcaccgccagaccgtgcaggaccag
ctggaagcggccctgcaacgcttcagcaccaccagcatcgccaccacctgcgccggccgt
accgattccggcgttcatgcgctggaacaggtggtgcatttcgataccgccatcgcccgc
gaccgtttttcctgggtgcgcggcaccaatgccttcctgccgcccaccatcgcggtgcgc
tgggcctgcgaactgccctgggtggatgacgccgccattgccggcgcccaggccgccgaa
ctgcacggggccgagcgggaaggggccgaaagcctggcccagttcggtttccatgcgcgc
ttttcggccatcgcccgcacctatcactatgtgctctacaaccatgcggtacgctcgccg
ctgctggcaggcaaggccggctggaccttccgcccgctggatgcagaccggatgcaccgg
gccgcgcaacacctgatcggtgaacatgacttcaccagcttccgcgccgtcgaatgccag
gccaagtccccggtgcgcaagatggaaagcatcgccgtgcggcggcatggcgatatgatc
gtttttaccttgaaggccaacgccttcctgcaccacatggtgcgcaacatcgtcggctcg
ctggtggtggtgggcagcggcaagcaggggccggaatggatggggcaggtgctggccctg
cgtgaccgcagccgcgctgcgccgactttcatgccggatggcctgtatctggcgcgggtg
gattatcccgatgcctgggcgctgccgcaggaaatgcgttcctggccttggctatag
DBGET
integrated database retrieval system
