Herbaspirillum rubrisubalbicans: Hrubri_3485
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Entry
Hrubri_3485 CDS
T04238
Symbol
livK
Name
(GenBank) Branched-chain amino acid ABC transporter periplasmic protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_3485 (livK)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_3485 (livK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_3485 (livK)
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hrubri_3485 (livK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
Stm1_N
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
ALU90644
LinkDB
All DBs
Position
4086706..4087848
Genome browser
AA seq
380 aa
AA seq
DB search
MKLKCAILPLTAAIGMAFAGAAYAQEVIKIAHVGPLSGPNAHMGKDNENGARMAVDELNA
KGFTIGGKKVKFELLGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDA
GIPQVSPSATNPKYTQQGFKTTFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQ
GVAQEFAKGAKAAGGTIVGTQFTNDKATDFNAILTSLKGKKPDVIFFGGMDAVGGPMLRQ
MKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVVCAEAGGVDEAGKKGMDDFRAAYKKK
FGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAHGDVKD
GSLTLYTYKGGQRTLLAVTK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaagtgcgccatccttcccttaactgctgcaatcggtatggcattcgcaggc
gcggcgtatgcccaggaagtcatcaagatcgctcacgtcggcccgctctccggccccaac
gcccacatgggcaaggacaatgagaacggtgcccgcatggcggtggacgaattgaacgcc
aagggcttcaccattggcggcaagaaggtcaagttcgaactgctgggtgaagacgacgcg
tccgatcccaagcaagccacggcggtagccaccaagctggtcgaccagaaggtcgccgca
gtgatcggccacctcaattccggcaccaccatcccggcctccaagatctacagcgacgcc
ggcattccgcaagtctccccctcggccaccaatccgaagtatacccaacaaggtttcaag
accaccttccgcgtggtcgccaacgatgcgcaactgggtgccgcactgggcaagtatgcc
gtgcagaagctgggtaccaagcagatcgccgtcatcgatgaccgtaccgcctacggccag
ggcgtagcgcaggaattcgccaagggcgccaaggctgctggcggcaccatcgtcggcacc
cagttcaccaatgacaaggccaccgacttcaacgccatcctgacttcgctcaagggcaag
aagccggacgtgatcttcttcggcggcatggacgccgtgggtggcccgatgctgcgccag
atgaagcagttgggtatcagcgccaagttcatgggtggcgacggtatctgtaccggttcc
ctgcccggcctggccggtgatggcctgggcgacgaccaggtggtatgcgccgaagcaggt
ggcgtggatgaagccggcaagaagggcatggatgacttccgcgcagcctacaagaagaag
ttcggcatcgacgtggtctacaacgccgcctacgcctacgacgccaccatgacggtggct
gacgccatggccaaggccggctctgccgatcccaagaagtacctgcccgaactggccaag
atcagccacaagggcgtgaccggcgtgatcgcctttgacgcccatggcgacgtcaaggat
ggctcgctgaccctgtacacctacaagggcggtcaacgcaccctgctggcggtgaccaag
taa
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