Herbaspirillum rubrisubalbicans: Hrubri_3548
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Entry
Hrubri_3548 CDS
T04238
Symbol
ubiD
Name
(GenBank) 3-polyprenyl-4-hydroxybenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00130
Ubiquinone and other terpenoid-quinone biosynthesis
hrb01100
Metabolic pathways
hrb01110
Biosynthesis of secondary metabolites
hrb01240
Biosynthesis of cofactors
Module
hrb_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Hrubri_3548 (ubiD)
Enzymes [BR:
hrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
Hrubri_3548 (ubiD)
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ALU90705
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Position
complement(4170899..4172383)
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AA seq
494 aa
AA seq
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MKYTDLRDFISKLQQKGELKRVSHPVSSRLEMTEIADRTLRAEGPALLFEQVDQKNIPVL
ANLFGTPHRVALGMGAQSISELRRIGHLLARLKEPEPPKGIKDVLDLGGLVKSLWDMAPK
ERSSAPCQDVVWEGQDVDLSRLPIQHCWPGDIAPLITWGLVITKGPHKKRQNLGIYRQQV
LGPNKVIMRWLAHRGGALDFREHCIAHPGQPYPVVVALGADPATILGAVTPVPDSLSEYQ
FAGLLRGSRTELVKAMGSDLRVPASAEIVLEGHIYPDEHHASGFEHALEGPYGDHTGYYN
EQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYL
PPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEVIWA
ITTRVDPVRDTVLVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETNREWGTPIVMSDE
VKKRVDTIWKDLGI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaccgatttacgagattttatttccaaattgcaacaaaaaggagagctgaaa
cgcgtctcgcatccggtttcgtcccgtctggaaatgactgaaattgccgatcgcaccctg
cgggccgaaggtccggcgcttctttttgagcaggtcgaccagaaaaatatccccgttctc
gcgaatcttttcggtactccccatcgtgtggccctgggtatgggggcgcaaagcatcagt
gagttgcgtcgcatcggccatctgctggcccgcctgaaggagccggaaccgcccaagggc
atcaaggatgtgctggacctgggcgggctggtgaagtcgctgtgggacatggcacccaag
gagcgtagctcagcaccctgccaggatgtggtgtgggagggccaggacgtggacttgtcg
cgcctgccgatccagcactgctggccgggcgacatcgctccgttgatcacctggggtctg
gtcatcaccaaggggccgcacaagaaacgccagaatctgggcatctatcgccaacaggtg
ctgggccccaacaaggtcatcatgcgctggctagcccatcggggcggggcgctggatttc
cgcgagcactgcatcgcccatccgggccagccttatccggtggtggtggcattgggtgcc
gatccggccactatattaggagcggtcacgccggtgcccgatagtttgtccgaataccag
ttcgctggtctcttgcgcggcagtcgcaccgaactggtcaaggccatgggtagcgacttg
cgggtaccggcctcggccgagatcgtgctggaagggcatatctacccggatgaacatcat
gcctccggtttcgagcacgcgctggaaggtccgtatggcgaccacaccggttattacaat
gaacaggactggttcccggtcttcaccattgaccgcatcaccatgcggcgcgatgccatc
tatcactccacctacaccggcaagccgcccgatgagccggcggtgctgggtgtggcgttg
aatgaagttttcgtccccttgctgcagaagcagtttgccgaaatcactgatttctacttg
cctccagagggatgcagctatcgcatggcggtagtgcagatgaagaaatcttacgccggc
cacgccaagcgggtgatgttcggggtctggagtttcctgcgccagttcatgtacaccaag
ttcatcgtggtggtggatgaggatgtcgacatccgcgactggaaggaagtgatctgggcc
atcaccacccgggtggatccggtgcgcgatacggtgctggtggataacacgcccatcgat
tacctggacttcgcctcgcccatcagcgggctgggcagcaagatgggtatcgacgccacc
aacaagtggcccggtgaaaccaatcgcgaatggggtacgcccatcgtcatgagcgatgag
gtgaaaaaacgcgtcgataccatctggaaggatctggggatttaa
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