Herbaspirillum rubrisubalbicans: Hrubri_3556
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Entry
Hrubri_3556 CDS
T04238
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrb03000
]
Hrubri_3556
Transcription factors [BR:
hrb03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Hrubri_3556
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Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
Motif
Other DBs
NCBI-ProteinID:
ALU90713
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All DBs
Position
4179961..4180599
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AA seq
212 aa
AA seq
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MSISTPITKRRGRPPRAREELMETQELLLHAGLEVLTEKGFSATGIDEILSRVNVPKGSF
YHYFASKEAYGLELIALYGAYFARKLDKHFTNEDVPPLERLEHFIEDAKLGMSRFDFRRG
CLIGNLGQEMGSLPESFRIRLVEVFQDWERRLSQCLKLAQKARQIPQTVHCDQMASAFWI
GWEGAVLRAKLESSAKPMDVFSQHFLASLKPA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcaactccaatcaccaagcgccgaggccgtcccccacgagcacgtgaggag
ctcatggagactcaagagttgctgctgcatgctggtttggaggtgctcaccgagaaaggt
tttagcgccacgggcattgacgaaattctgagccgagttaacgtaccgaaggggtcgttc
taccactacttcgctagcaaagaggcctatggtctggaattgatagcactgtacggcgcc
tacttcgcccgaaagcttgacaagcactttacaaatgaggatgttccgccacttgagcga
cttgagcatttcatcgaagacgccaaactcgggatgtcgcgtttcgactttcgccgtggc
tgcctaatcggcaaccttggtcaagaaatgggttcgctacccgagagcttcagaatacga
ctcgtagaggtcttccaggactgggagcgccgtttgtcccagtgcctgaagttggctcaa
aaggctcgtcaaataccccagacagtccattgcgaccaaatggcatctgcattctggatt
ggctgggaaggtgcagtcctgagggccaagctggaatccagcgctaaacccatggacgtc
ttttcccaacattttcttgcatctctgaagcccgcgtaa
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