Herbaspirillum rubrisubalbicans: Hrubri_3663
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Entry
Hrubri_3663 CDS
T04238
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrb03032
]
Hrubri_3663 (gyrA)
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_3663 (gyrA)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Hrubri_3663 (gyrA)
DNA replication proteins [BR:
hrb03032
]
Prokaryotic type
DNA Topoisomerases
Hrubri_3663 (gyrA)
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hrubri_3663 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALU90820
LinkDB
All DBs
Position
complement(4311842..4314487)
Genome browser
AA seq
881 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN
RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM
RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNITEVINGALHLLANEHCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSKSWDSSMV
REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK
IVNEYKDVMAQIADLLDILSKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA
TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY
ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY
VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR
FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVDSSDEIMLITTGGVLIRTRVSEIREMGRATQGVTL
IAVEDGTKLSGLQRVVESDVEDVIESEGTEAAGGETPAAGE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgctaaagaaaccatccccatttccctcgaagaagagatgcgcaagagt
tacctcgattacgccatgagcgtgatcgtgggtcgggcactgccggatgtgcgcgatggc
ttgaagccggtgcaccgccgcgtgctgtatgcgatgcacgagatgaacaacgtctggaac
cgcccgttcgtgaagtgcgcgcgcgtggtcggcgaagtcatgggtaagtaccacccgcac
ggcgacgcctccatctatgacaccctggtgcgcatggctcaggacttctcgttgcgctat
accctggtcgatggccagggcaacttcggttccatcgacggcgacggtgcggctgcgatg
cgttacaccgagtgccgcctggacaagatttccaacgaattgctggccgatatcgagaag
gaaaccgtcgatttcgtgcccaactacgacggtaaggaaaaggaaccctcggtcctgccg
acccgtatccccaacctgctggtcaacggctcctccggcatcgccgtgggcatggccacc
aacattccgccgcacaacatcaccgaagtgatcaacggcgcgctgcacctgctggccaat
gaacattgcaccatcgatgaactcatcgagctggtgccggcgccggacttcccgaccggc
ggcatcatctatggtgtctcgggcgtgcgcgatggttaccgcaccggccgtggccgcgtg
gtcatgcgcgccaagacacacttcgaggaatatggccgcgaaggccgtatcgccatcatc
gtcgatgagctgccctaccaggtcaacaagaaggcgctgctcgaacgcatcgccgagctg
gtgcgcgacaagaagctcgaaggcatctccgacctgcgcgacgaatccgataagtcgggt
atgcgcgtggtcatcgaattgaagcgcggtgaagtgccggaagtggtgctcaacaatctg
tacaagcagacccagttgcaagacaccttcggcatgaacatggtggcgctggtcgatggc
cagccgcgcctgttgaacctgaagcagttgctggaatgcttcctgtcgcaccgccgcgaa
gtggtcacccgccgcaccgtgttcgaactgcgcaaggcgcgcgaacgcggccacgtgctc
gaaggcctggctgtggcactggccaacatcgatgacttcatcgccatcatccgtgccgca
ccgaccccgccgatcgccaaggccgagctgatgtcgaaatcctgggattcgtccatggtg
cgcgagatgctggcccgcgccggcgaagccaacgaaggcggcatcgaagccttccgcccg
gaaagcctgccggcccattacggcatccagtccgacggcctctacaagctctccgacgaa
caggctcaggaaatcctgcagatgcgtctgcaacgcctgaccggtctggagcaggacaag
atcgtcaatgaatacaaggacgtgatggcgcagatcgccgacctgctggatatcctgtcc
aagccggcccgcgtgacggccatcatcaccgacgaactcaacgcagccaagaacgacttc
ggcatcggcgccaaggacgagcgtcgctccaccatcgagcacaacgccaccgacctggct
accgaagacctgatcacgccgcaggacatggtggtcacgctctcgcacaccggctacatg
aagtcgcagccggtctccgagtatcgcgcgcaaaagcgcggcggtcgcggcaagcaagcc
atggcgaccaaggatgacgactggatcgaccagctcttcatcgccaacacgcacgactac
atcctgtgcttctccaaccgtggccgcctgtactggctgaaggtctgggaagtgccgcag
ggttcgcgcaattcgcgcggcaagcccatcgtcaacatgttcccgctgcaggatggcgaa
aagatcacggtgatcctgccggtgtcgggcgccaaccgcagcttcccggatgaccgctac
gtcttcatggccaccagcctgggaacggtcaagaagacgccgctgtctgacttctccaat
ccgcgcaaggccggcatcatcgcggtcgacctggatgaaggcgacttcctgatcggtgcc
gcgctgaccgatggacagcatgacgtgatgctgttctcggatggcggcaaggccgtacgc
ttcgatgaaaacgatgtgcgtccgatgggccgtaccgcccgtggcgtgcgcggcatgaac
ctggaagaaacgcagcaggtcatcgccctgctggtggctgaaaacgagcagcagtcggtg
ctcaccgccaccgaaaacggcttcggcaagcgtactccgatcaccgagtacacccgccat
ggccgtggcaccaagggcatgatcgcgatccagaccagcgagcgcaacggtaaggtcgtg
gccgccaccctggtggactccagcgatgagatcatgctgattaccaccggtggcgtgctg
atccgcacccgcgtttccgagattcgcgagatgggtcgcgccacccaaggtgtgaccctg
atagcagtggaagacggcaccaagctgtccggcctgcagcgcgtggttgagtccgatgtg
gaagacgtgatcgaaagcgaaggtaccgaggccgccggcggtgagacacctgccgctggc
gagtga
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