Herbaspirillum rubrisubalbicans: Hrubri_3694
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Entry
Hrubri_3694 CDS
T04238
Name
(GenBank) deoxyribodipyrimidine photolyase protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_3694
Enzymes [BR:
hrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Hrubri_3694
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Hrubri_3694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALU90851
LinkDB
All DBs
Position
4347054..4348598
Genome browser
AA seq
514 aa
AA seq
DB search
MNPIPATTLRLILGDQLNPQHSWFERVDTDVVYVLMEVRCETDYVLHHAQKILAIFAAMR
AFGEHLRAAGHRVSYIRLDDPSNRQRLEDNLSALASHYQARCVQWQAPDEWRLDQALQQW
GDQQDLQTVVVDSEHFLTIRDELPRLFAGRKQWLMEQFYRQIRRRFALLLDAQGQPEGGQ
WNFDHDNRKRWPGTPPQPQDWRTPHDHGALWAMLQTQGVASFGDPLATQLRWPLTRAEAL
HHLEHFIQAVLPYFGDYEEAMSSQAQRLFHSLLSFALNVKMLHPLEVVRRAEAAYRAGHA
PLAAVEGFIRQIIGWREYVRGIYWSQMPGYEQRNALDHRLPLPAWFWTGQTGMNCLRHAI
GQSLQTAHAHHIQRLMVIGNFALLARLDPKALHQWYLGIYIDAFEWVELPNTLGMSQWAD
GGLIATKPYVSSAAYIGRMSDYCRGCAYDPKQKTSEQACPFNALYWDFFLRHQARFGHNP
RLGMVYQQIRKMAPADLEALQARAQTLRSQLDTL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccattcccgccaccacgctgcgcctgatcctgggcgaccagttgaatccacag
cattcctggttcgagcgcgtcgataccgatgtggtctacgtgctcatggaagtgcgctgc
gaaaccgattacgtgctgcatcatgcgcaaaagatcctggccatttttgccgccatgcgc
gccttcggcgaacacctgcgcgcagccggtcaccgggtgagctatatccggctggatgat
cccagcaaccgccagcggctggaagacaacctgtcggcgctggcaagccactaccaggcg
cgctgcgtgcaatggcaggcgccggatgaatggcggctcgaccaggccttgcagcaatgg
ggcgatcagcaggacttgcagacggtagtagtcgatagtgaacacttcctgactatccga
gatgaattgccgcgcctcttcgcaggccgcaagcaatggctgatggagcagttctaccgt
cagatacggcgccgcttcgcattgctgctcgatgcccagggtcaacccgaaggcggtcaa
tggaatttcgaccacgacaaccgcaagcgctggcccggcacgccaccgcagccgcaagac
tggcgcacgccacatgaccacggggcgctatgggccatgctgcaaacccagggtgtggcc
agcttcggcgatcccctagccacgcaattgcgctggccgctcacgcgcgccgaagccctg
caccacctggagcatttcatccaggccgtgctgccgtatttcggcgactatgaagaagcc
atgagcagccaggcccagcgcctgttccattcgctgctgtcctttgcgctcaacgtcaag
atgctgcatccgctggaagtggtgcgccgcgccgaagcggcctatcgggccggccatgca
ccgctggcggccgtggaaggtttcatccgtcagatcatcggctggcgtgaatacgtgcgc
ggtatctactggtcgcagatgccgggctacgaacagcgcaatgcgcttgaccaccggctg
ccgctgccggcctggttctggaccggccagaccggcatgaactgcctgcgccacgccatc
ggccagtcgctgcagaccgcccacgcgcatcacatccagcgcctgatggtgatcggcaac
tttgcgctactggccaggctggaccccaaggccctgcaccagtggtacctgggcatctac
atcgatgccttcgaatgggtggagttgcccaataccctgggcatgagccaatgggctgat
ggcggcctcatcgccaccaaaccctatgtcagcagcgccgcctatatcggccgcatgagc
gactattgccgcggctgcgcctatgatcccaagcaaaagaccagtgagcaggcctgcccc
ttcaatgccttgtactgggatttcttcctgcgccaccaggcccgcttcggccacaaccca
cgcctgggcatggtctaccagcaaatcaggaagatggcgccagccgatctcgaggcgcta
caagcgcgcgcccagactctgcgcagccagctggataccctctag
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