Herbaspirillum rubrisubalbicans: Hrubri_3702
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Entry
Hrubri_3702 CDS
T04238
Name
(GenBank) signal transduction protein containing sensor and EAL domains protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Hrubri_3702
Enzymes [BR:
hrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Hrubri_3702
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GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
PSI_PsaJ
Motif
Other DBs
NCBI-ProteinID:
ALU90859
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Position
complement(4357532..4359166)
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AA seq
544 aa
AA seq
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MNNKSKVVALAIVATVVAAIAPVAGMLWLSRQAVIQAEHERLARYAETVVERAESTFQAT
QRSLKSLSPLFLHPCSDEHIAQMRMIAVYSNAIEEIGYYEYGQLKCTSWERNVQAQRRAQ
PRPLFTTREGVGVAPQQPSFIAGGPSMMSIQYGSHAALVHRDRFVDVVLEDGVHVVLARN
GFGQVAQYGIPIDPGVAAHALRGVGQQDVDGFFVSTVSRDGWTAAAIINGQQVLDSMTSE
QRWFLPVGVLLGLALVLLVVRASQARLSPLAELQLAVRKREFIVCYQPIIELDSGRCVGA
EALIRWKRPDGSIVRPDLFIPLAEESGLILPLTDLVIETVVAELGAILRADRALHVAINV
AAQDIKTGRILEVVGKNLAGTDIRTEQIWMEATERGCMDIASARVTLARARELGHSMALD
DFGTGYSNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLNLYIVAEGVE
TLEQAAYLSQQEVDFVQGWLFAKPMPAGEFVDFYRATLADYGTGPEIIRGPYPANEPASP
LKLV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaataaaagcaaggtggtggcactggcgatcgtcgccacggtcgttgccgccatc
gcaccggtggcgggaatgctgtggctatcgcgtcaggcggtaatccaggccgagcacgaa
cggctggcgcgctatgccgaaaccgtagtggaacgcgccgaaagcacctttcaggccacc
cagcgctcgctcaagagcctctcgccgctgttcttgcatccctgctcggatgagcatatc
gcgcagatgcgcatgattgccgtctattccaatgccattgaggagatagggtattacgaa
tacggccagctcaagtgcacttcctgggagcgcaatgtacaggcgcagcggcgtgcgcag
ccaagacccctgtttacgacccgggagggtgtcggcgtggcgccgcagcagccctctttc
attgccggtggtcccagcatgatgtcgatccagtacggttcccacgctgccctggtgcat
cgcgatcgtttcgtcgacgtggtgctggaagatggcgtgcacgtggtgctggcgcgcaat
ggtttcggacaggtggcccagtacgggataccgatcgaccccggcgtagcagcacatgcg
ctgcgcggcgtggggcaacaggatgtcgatggtttctttgtctctaccgtcagccgcgat
ggctggacggcggcggccatcatcaatggccagcaggtgctcgacagcatgaccagcgag
cagcgctggttcctgccggtgggggtgctgctgggactggccctggtgctgctggtggtg
cgcgcgtcgcaggcgcgcctgtcgccactggccgaactgcaactggcggtgcgcaagcgc
gaattcatcgtctgttaccaacccatcatcgagctcgatagcggccgctgcgtgggcgcc
gaagcgctgatccgctggaagcgcccggatggcagcatcgtgcggcccgatctgtttatt
cccctggccgaggaaagcggcctgatcctgccgctgaccgacctggtcatcgaaaccgtg
gtggccgaactcggcgccatcctgcgcgctgaccgtgccctgcacgtggccatcaacgtg
gcggcccaggacatcaagaccggtcgcatcctggaagtggtcggcaagaatctagcgggc
accgatatccgtaccgagcagatctggatggaagcgaccgagcgcggctgcatggacatc
gcttcggcccgcgtcaccctggcccgggcgcgcgagctggggcattcgatggcgctggat
gacttcggtaccggttattccaacctgcaatacctgcagggcctgcccatggatgcgctc
aagatcgacaagtccttcgtcagcaccatcggcacgggggctgccaccagtgccgtgatc
gatcacatcattgccatggccaagagcctgaacctgtacatcgtcgccgaaggcgtggag
acgctggaacaggccgcctacctgagccagcaggaggtcgacttcgtgcagggctggctg
tttgccaagcccatgccggctggtgagttcgtcgatttctatcgggccaccttggccgac
tatggtaccgggccggagatcattcgcgggccgtatccggccaacgagccggcgtccccg
ctcaagctggtgtga
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