Herbaspirillum rubrisubalbicans: Hrubri_3782
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Entry
Hrubri_3782 CDS
T04238
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, dctQ-M fusion permease, large permease component protein
KO
K21393
TRAP-type transport system permease protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hrubri_3782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_3782
Transporters [BR:
hrb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Hrubri_3782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ALU90939
LinkDB
All DBs
Position
complement(4446382..4448265)
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AA seq
627 aa
AA seq
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MMEAAMTYRAPARLHPAARALVGLNRLVMQVVGAVAAGLVLAETVVLLTGVIYRYALHDP
LVWSDELASMLFIWLSMLGAVLALDRGEHMRLTAIINKCSEQGRIWLETVAALVVCIFVL
MVIHPAIDHAVEQMPITTPALEIPDGLRAAALPVGAILMLLAAVSRMAAMTTLRLLLSAL
AVVAVIGAALWLAKPMLLAMGNYNLIVFFVLLIGVCVAAGIPIAFAFGTATMAYLALATT
APLMIVVSRMDEGMSSLILLSVPLFVLLGSLLEQSGLAKTLIDFMAALLGHVRGGLQYVL
LGAMFLVSGISGSKAADMAAIAPALFPEMKKRGSQPEELVALLSSSGAMTETIPPSLVLI
TIGAVCSVSITALFIGGLMPAAIATLAIAVVCWRRARREPMPAVKRAPVSLILKTLIAAI
PALALPMLIRVAVIEGVATATEVATIGVAYTVVVGLVMHLFMRHLDFKRLYPMLIEAAAL
SGAILLIIGMATAMAWALTQSGFSAKLVAIMQGVPGGAAGFLLITIVIFIVLGSLLEGIP
AIVLFGPLLFPVARSLGVHDVHYAMVVILAMGIGLFAPPFGVGFYAACAIGKVSPDGVFN
RVWGYLAALVVALLVVAFVPWISIGFL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagctgcaatgacttatcgcgccccggccaggctgcatccggctgcgcgcgcg
ctggtcggtttgaatcgcctggtcatgcaggtggtgggcgcggtggccgccggcttggtg
ctggccgagaccgtggtgctgctgaccggtgtgatctatcgctacgccttgcatgatccg
ctggtgtggtcggatgaactggcctcgatgctcttcatctggctctccatgctgggcgcg
gtgctggccctggatcgcggcgagcacatgcggctcaccgccatcatcaacaagtgttcc
gagcagggccgcatctggctggagacggtggccgcgctggtggtctgcatcttcgtattg
atggtgatccatccggccattgatcacgcggtggaacagatgcccatcaccaccccggcc
ctggaaatccccgatggcctgcgcgctgcggccttgccggtgggcgccatcctgatgctg
ctggcagcggtctcgcgcatggccgccatgaccacgctgcgcctgctgctctcggcgttg
gcggtggtggccgtgatcggcgcggcactgtggctggccaagccgatgctgctggccatg
ggcaactacaacctgatcgtcttcttcgtgctgttgatcggcgtgtgcgtggccgctggc
attcccattgccttcgccttcggcaccgccaccatggcctatctcgcactggccaccacg
gccccgctgatgatcgtggtcagtcgcatggatgagggcatgtccagcctgatcctgttg
tcggtgccgctgttcgtgctgctgggctcgctgttggaacagtcgggcctggccaagacc
ctgatcgatttcatggcagcgctgctgggccatgtgcgcggtggtctgcaatacgtattg
ctgggggcaatgttcctggtctccggtatttccggttccaaggccgccgacatggccgcc
atcgccccggccttgttccccgagatgaaaaagcgcggctcccagcccgaagaactggtg
gcgctactctcgtcgtcgggcgccatgaccgagaccatcccacccagcctggtattgatc
accatcggcgccgtgtgcagcgtgtcgattacggcgctctttatcggtggcctgatgccg
gccgccattgccaccctcgccattgccgtggtgtgctggaggcgtgcccggcgcgaaccc
atgcccgcagtcaagcgcgcccctgtctctttgatcctcaagaccctgattgctgccatt
cccgcattggcgctacccatgctgatccgcgtggcggtcatcgaaggcgtggccacggcc
accgaagtggccaccatcggcgtggcctatacggtggtggtgggactggtcatgcacctg
ttcatgcggcacctggatttcaaacgtctttatcccatgctcatcgaggcagcggccttg
tcgggcgccatcctgctcatcatcggcatggccaccgccatggcctgggcactgacgcag
tcggggttctcggccaagctggtggcgatcatgcagggcgtgccgggcggtgctgccggt
ttcctgctcattaccatcgtcatcttcatcgtgctgggcagcctgctggaaggcattccc
gccatcgtgctgttcgggccgctgctgttcccggtggcccgttcgctgggcgtgcatgac
gtgcactatgcgatggtggtgatcctggccatgggcatcggcctgtttgcgccgcccttt
ggcgtgggcttctatgccgcttgcgccatcggcaaggtctcgccggacggcgtcttcaac
cgggtctggggctatctggccgcgctggtggtggcgctgttggtggtggccttcgtgcct
tggatttccatcggtttcctctga
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