Herbaspirillum rubrisubalbicans: Hrubri_3845
Help
Entry
Hrubri_3845 CDS
T04238
Name
(GenBank) Lipid A 3-O-deacylase protein (PagL)
KO
K12976
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hrubri_3845
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Hrubri_3845
Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Lipid A
Hrubri_3845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PagL
Motif
Other DBs
NCBI-ProteinID:
ALU91002
LinkDB
All DBs
Position
4519697..4520257
Genome browser
AA seq
186 aa
AA seq
DB search
MTKMKSLVAKIAFAGVAAFAIQSPSYAFGLDGMSLEYGTGNSTQLARLGAQFNWGPNWNF
WQSNGTHIGGYWDLSLANWRMNHYNKTNDSANLVDLGLTPVLRFQRDDGKGFYGEAGIGV
HLFSKLYRNNDKVLSTAFQFGDHVGAGYVFSNGLDLGIRLQHFSNGGIKEPNGGVNFAVA
RVAYKF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaatgaagagcctggttgccaagatcgcttttgctggcgtcgccgcctttgcc
atccagtcccccagctacgccttcggcctcgacggtatgtcgctggaatacggtaccggc
aacagcactcagctggcccgtctgggtgcccagttcaactggggtccgaactggaatttc
tggcaatccaacggcacccacatcggtggctactgggatctgtcgctggccaactggcgc
atgaaccactacaacaagaccaatgacagcgccaacctggtcgatctgggcctgaccccg
gtgctgcgtttccagcgtgacgatggcaagggcttctatggcgaagccggcatcggcgtg
catctgttctccaagctgtaccgcaacaacgacaaggtcttgtccaccgccttccagttc
ggtgaccatgtcggcgccggctatgtgttcagcaatggcctggacctgggcatccgcctg
caacacttctccaacggcggtatcaaggagcccaacggcggcgtgaactttgccgtggcg
cgtgtggcctataagttctaa
DBGET
integrated database retrieval system
