Herbaspirillum rubrisubalbicans: Hrubri_3904
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Entry
Hrubri_3904 CDS
T04238
Name
(GenBank) filamentous hemagglutinin protein
KO
K15125
filamentous hemagglutinin
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrb00536
]
Hrubri_3904
Glycosaminoglycan binding proteins [BR:
hrb00536
]
Heparan sulfate / Heparin
Microbial pathogens
Hrubri_3904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
ESPR
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
ALU91055
UniProt:
A0A0U3M282
LinkDB
All DBs
Position
complement(4592281..4599453)
Genome browser
AA seq
2390 aa
AA seq
DB search
MNKKAYRIVFNAHRGALMVVAENRGGDHGRGASGGTGAPGVVGGRASRSMRMAQLAVLVC
ALFGGVTVVSAQIVADRNAASRPVVDQSANGRPVVQIVTPNAAGVSHNRYDQFNVGQNGA
ILNNSGAVSQTQQAGLVAGNPALVNGSARMILNEVTGASRSQLNGYIEVAGQRADVIVAN
PNGISCSSCGFINTSRGVLTTGTPELASDGSLASLRVKRGDISINGMNASDIDRVDLIAR
SVQVNGALWANQLNVITGANLVNYANLGVQVIQGDGAPPTVGIDVAQLGGMYANRIRLIG
TEAGVGVRSLGNISAQSGDFEIDNSGKITLAGNTTATGTVTIHSGTGISNSGTMYGQQNV
TLTSEGQVGNSGTVAAQGSLNISGDSISASGTFGAGVDSSGNVTRAADLSLNAAATLAAN
GQNTAGGNMIMRGASLDLAGAQTSSAGNATLIATAGDIDHTGGNLQVAGMAAISAAGSLT
NNAGTINANQLALTSANLSNRQGKIVQYGNGATQILVANTLDNSNGGTLKSNSTDLSLTP
QVLNNDGGTIALAGSGQLAIRAGGVSSVGGSIGGNGAVTVVANTIGNRAGSIFSQRLLNV
TAIQGAIDNSAGGAMRSATGAIVTATAAINNSGGTIEANGTTDSLTVSAASLDNSAGRIS
NSGTGVTQINGGSQINNRQGSLVANGPLELQAASLDNSQQGKIAASGDLTLDVATSLNND
SASITAGTTLTINAANAAVSNVGGTLSASGEIAATADSVDNTSGFIGSTAGSNVGLTNRR
NLVNTGGTVASGRNLGIKANTIIGVGKLAASQDLTLNLQGDYVNEVGNVLSANHNLTFIT
TGQLINRASLTAVNTLSVQASGLNNQATGLINAGTTLIKVPGSIMNTGRIYGDDIALGAQ
SLTNDLDTASGQAGVIASRNSINIGASGIVNREHALIQSLGNMSIGGVLDANNLATGAAN
SITNESATIDAGGNLNLQTATLINRNNHFSTTVQEDPTLTQHVTEYADWTQPNIWYRADQ
VTWSDSGGGGIVLVRPDGNRFEKFYKRDYTEVVQKTVVLSSDPGKISAGGNMILSGNVTN
DKSVMVAGGTLGGTAGTINNVGATGTDTTVWHMTAGQNYYHWVSGHPHTNYYTYNNGGAA
YDNVQASTTSDLPVWSVQQNTNPGSSANPAASQPANGSTVPTAAGLSGSAATGNRNIQTI
GGASNALPSLRLPNNRLFTLHPQPGQNYLVETDPKFTDYKTFISSDYMLGRLALDPQNIQ
KRLGDGFYEQKVIGDQITELTGKRILGGYASAEDQYKALMDAGVASAAKFQLTPGIALSD
AQMAALTSDIVWLVAQMVTLPDGTQTSVLAPVVYLSRASTEDIKPTGTLISGKDIDLTVN
GTLDNGGTLLASNSMIVRATDIKNTGTIQGNATTGDVGLVASNDVFSSGTISGNRVGILA
GRDVTLASTTSSNLAANGLNTKVDQVSTVKAGQLAVQAGRDINAVAASIQTSGDANLAAN
RDVNLGTVKTQESYNVTFNSRNHLNESTTEVVGTSIETKGALTISAGQDLNAQAAYANAG
GVLTANAARNVNIGVAQQESTLDQAIYTTSKGLFSSSTSSSTNKSATTTSVGSTFSGDSV
KVRAGNDLAVTGSNIVGTKDVALSATNVTITSAQNTGTSEVTSRETSSGLMGSGFGVSIG
SRAMDRDTVSSSVSNVGSSVGSVSGNVTIAATDRYAQTGSSVLAPGGDISISAKTVDINA
AYDTSSSTDKQSVRQSGLTLALTAPAITALQTVRQMSQASKQTNDPRMLAMAAATAGSAV
KDAYSSVSNMAENPQDMSGVKITLSVGSSKSDNTVVQTAQRAVGSNVGAGGNVSIVASGA
GQQSNISAVGSTISAGNNIALKADNQINLLAAQNTSSQHSTNSSSGASLGIGFAMGGSQN
GFTLEAGINKGRGNADGSDITNVSTKVRAGNTVSLGSGGDTTLKGATVTGNTVSAKVGGD
LNIESLQDTSKYDSKQQSAGVSVSVCVPPFCYGASSASGNVASSKVKGDFASVTEQSGIK
AGEGGFDVAVKGNTDLKGGVIESSQKAIDDNKNRLTTGTLTQSSIQNHDNYDASGFSVSG
SVSGKMGDQTPTNSMSDANRTAATSKTKPGGSSGISSNSGSQGSTTLSGISGGALNITND
DAQRAKTGQSAAEAVASVNRDVSTDKDTSGALTKSWDGGKLMQQTQAEVQITAAFGSAAA
KAIGDYGDLQLKQARALRNAAASEPDAEKRDAMLSNAQSIEDKWGESGTARVGAHALVGG
ITGGLQGALGAGTSAALASSLNNLMNNADLPEPLKQSVGAALASAAGALAGGANGAAAAF
NEDVNNRQSNHGEQLWIKKQANGDAKKEARLAAAACAVVNRPDFRGGYLV
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaagcatatcgaatcgtattcaatgcacacaggggtgcattgatggtggtg
gccgagaacaggggcggggatcacggtcgtggggccagcggcgggaccggcgccccgggt
gtcgtgggtggccgtgcatcaaggtcaatgcggatggcacagctggccgtattggtctgt
gccctgttcggcggggtgaccgtggtctcggcgcagattgtcgccgaccgcaatgcggcg
tccagaccggtcgtggatcagtccgccaacgggcgtccggtggtgcagatcgtgaccccg
aatgctgctggcgtttcacataatcgttacgatcagttcaacgtcggtcagaacggggcc
atcctcaataactcgggggcggtatcgcagacccagcaagccggcttggtggcaggcaat
ccggcattggtcaatggtagcgcccggatgattctcaatgaggtgaccggtgcctcacgg
agccagctcaatgggtatatcgaagtggcgggccagcgcgctgacgtcatcgtagccaat
ccaaacgggatttcgtgcagcagttgcggcttcatcaataccagtcgtggcgttctgacg
accggtacgcccgaacttgcaagcgatgggagtctggccagcctgcgggtcaagcgtggc
gatatcagtatcaacggcatgaatgccagtgacatcgatcgtgtggacctgatcgcacgc
agcgtgcaggtcaacggggcgctgtgggcaaatcaactgaatgtcattaccggtgcgaat
ctggtgaactacgccaatcttggcgtacaagtcattcagggagacggtgctcccccgacg
gtgggtatcgacgtggcccagttgggcgggatgtacgccaacaggatccgattgatcggc
accgaagccggtgttggtgtgcgcagcttgggcaatatctctgcgcagtcgggggacttt
gagattgacaatagcggcaagatcaccctcgctggcaatacgactgcgaccggcaccgtc
accattcacagtggcaccgggatcagcaatagcggcaccatgtatggccagcaaaacgtc
acgctgaccagcgaaggccaggtaggcaatagtggcactgtcgctgcgcaaggcagtttg
aatatcagcggtgacagtatcagtgcaagcggaacgttcggagctggcgttgatagcagc
ggcaatgtgactcgcgcggcggatctcagcctgaatgcggccgcgacactggccgccaat
ggtcagaacaccgcgggtggcaacatgatcatgcgtggtgccagtcttgatctggcggga
gcgcaaaccagcagtgcgggcaatgccactcttattgcgacggccggcgacattgatcat
acgggcggtaatttgcaggtcgcagggatggccgcgatcagcgcagcgggttctctcacc
aacaacgccgggacgatcaatgccaatcagttggcgctgaccagtgcgaatctcagcaac
aggcagggcaaaattgttcaatacggtaacggggcaacgcagatccttgtcgccaacacc
ctggacaacagcaacggtggaacgctcaagagcaacagtacggacctgagcctgacgcca
caagtcttgaacaacgacggcggcacgatagcgctggctggttctggacagctcgccatc
agggcgggcggtgtctccagcgtgggtggcagcattgggggcaatggcgcggtcacggtt
gttgccaacacgattggcaaccgggcgggctctatcttcagtcagcggctactcaatgtg
acggccatacaaggtgccatcgacaatagtgctggaggcgcaatgcgcagcgctaccggc
gccatcgtgacagcgaccgcggcgatcaacaacagcgggggcaccatagaagccaatggc
actaccgacagtctgaccgtgtcggccgccagtttggacaacagtgctggacgtatttcc
aatagcggcactggcgtgacgcagatcaatggaggaagccagatcaacaatcgccagggt
tcactcgttgcgaacggccccttggagctccaggctgccagcctggacaatagccagcaa
ggcaagattgccgcgagcggcgacctcacgttggatgtggccactagtctcaacaatgac
agcgccagcattacggctggtacgacgctgacgatcaatgccgctaatgcagcggtgagc
aacgtaggcggcactctcagcgcctcgggagaaatcgctgccaccgccgatagcgtggat
aacaccagcggcttcatcggcagcactgcgggtagcaatgtcgggctgaccaatcgtcgc
aacctggtcaacaccggcggcacggtcgccagtggccgcaatcttggcatcaaagccaat
acgatcatcggcgttggcaagctcgcagcgtcgcaagatctgacgttgaatctgcaaggc
gactatgtgaacgaggttgggaatgtattgagcgccaaccacaacctgactttcatcacc
accggtcaactgatcaaccgggcttcactgactgcggtcaatacgctatctgtccaagcg
tctggcctcaataaccaggctactggtctcatcaatgccggcacgacgctcatcaaagtg
cctggctccatcatgaacaccggtcgcatctatggcgatgatattgcattgggtgcacag
tcgctgaccaacgatcttgatacggcgagcggacaagctggggtcattgcctcgcgaaac
agcatcaacattggtgcgtccggtatcgtcaaccgcgagcacgcgctgattcagagtctg
ggcaacatgagcattggcggtgtactcgacgcgaataatcttgcgacaggtgcggcaaat
agcattaccaatgagtcggccaccattgacgccggtggcaacttaaacttgcagacggcc
acgctcatcaatcgcaacaatcattttagtacgacagtacaagaagatccgacgctcacc
caacatgtgacggagtatgcggactggacccagccgaatatctggtacagggcagatcag
gtgacgtggagcgatagcggtggtggcggcatcgtgctggtgcgtcccgatggaaatcgc
tttgagaagttctacaagcgcgattacaccgaagtggtccagaagacggtggtcttgagc
agtgaccctggaaagatcagtgccggcggcaacatgatcctgtccggcaatgtgaccaat
gacaagagcgtcatggttgcgggcggcacgcttggcgggacggcggggaccatcaacaac
gtcggggccacaggaacagacacgacggtctggcacatgaccgcaggtcagaactactat
cactgggtgagtggtcatccgcataccaactattacacctacaacaatggtggcgcggct
tacgataacgtgcaggcctcgaccaccagcgatctgccggtctggagcgtgcagcagaac
accaatccgggcagtagcgccaatcctgcagcttctcaacccgctaacggcagtaccgtc
ccaacagccgctggtctttccggcagcgcggcgactggtaaccgcaacatccagaccatt
ggtggggcgagcaatgccctgcctagcctgaggctgccgaataaccggctatttactttg
catccgcagcccggacagaattacctggtcgagacggatcctaaattcaccgactacaag
acgtttatttcaagcgattacatgctgggaaggctggcgcttgatccgcagaatatccaa
aagcgtcttggcgatggtttctatgagcaaaaggtcatcggtgaccagatcacggaactg
actggcaaacgcattctgggaggctatgccagcgctgaagaccagtacaaggcactgatg
gatgcaggcgtggcgtccgctgccaagttccagctcacgcccgggattgctttgagcgat
gcgcagatggcagcgctcacgtcggacattgtgtggctggtagcgcaaatggtgaccctg
cctgacggcacgcaaacatccgtactggcaccggtggtgtatctgagccgagccagtacc
gaagacatcaagccgaccgggacattgatttccggcaaggatatcgatctgacggtcaac
ggtacactcgacaatggcggcacgttgctggcgtcgaacagcatgattgtgcgggcgact
gacatcaagaatactgggacgatccaaggcaatgcgacgaccggcgatgtcgggctggtt
gccagcaacgacgtttttagcagtggaaccatcagcggcaatcgcgtggggatcctggcg
gggcgggatgtgacgctggcgagcacgacctcatccaatcttgctgccaatggcttgaac
accaaagtcgatcaggtcagcacggtgaaagcgggtcaattggcggtgcaagccggccga
gacatcaatgcggtggccgcctccattcagactagtggcgacgcaaatcttgccgcgaat
cgtgatgtgaacctcgggacggttaaaacgcaagagagctacaacgtcaccttcaatagc
cggaaccacctcaacgagagtacgacggaggtcgtcggcaccagcattgagacaaaggga
gcactgacaatcagtgcagggcaagacctgaatgcacaggcagcttacgccaatgccggt
ggcgtgctcactgcgaacgcggcaaggaacgtgaacatcggggtggcccagcaggaaagc
actctggaccaagccatctacaccacctcgaaaggactgttcagctcctccacgagctcg
tcgaccaataaatcagccacgacgacttcggtcggttcgaccttctcgggcgatagcgta
aaagtgcgggcaggcaatgatcttgcggtcaccggcagtaacatcgtgggcaccaaggat
gtagcgctatcggccaccaacgtcaccatcaccagcgcacaaaataccggcaccagcgag
gttaccagccgtgaaacgtcgtctggtttgatgggcagtggatttggcgtgtccattggc
agccgggcaatggaccgcgatactgtctcctcttcggtcagcaatgtggggagcagtgtg
ggtagcgtgagcggtaacgtcaccattgccgcgaccgatcggtatgcgcaaacaggtagc
agcgtcttggcaccaggtggcgatatcagcattagtgcgaagaccgtcgatatcaatgct
gcctacgatacctcgtcgtcgaccgacaagcagtcggtgcgtcagagcggattgacgctg
gcgctcacggcaccggcgatcaccgccttgcagactgtacgccagatgtcgcaggcatcg
aaacagacgaacgatcctcggatgttggccatggctgcggcaaccgcaggtagcgccgtg
aaggacgcatattccagtgtcagcaacatggcagaaaatccgcaggacatgagcggggtc
aagataacgctgagtgtcgggtcttccaagagcgacaacaccgtcgtgcagacggcacaa
cgggcggtaggcagcaatgtgggcgcgggtggcaatgtcagtatcgttgcaagtggtgcc
ggtcaacagagcaatatctctgcggtgggcagtacgatttcggcgggcaacaacatcgcc
cttaaggctgacaaccagatcaatctgcttgctgcacaaaacaccagcagccaacacagt
accaatagctccagtggtgccagtctgggtattggttttgcgatgggtggtagccagaat
ggctttacgctcgaagcgggtatcaataaaggacgtggcaacgctgatggcagcgatatc
accaatgtcagcacgaaggtccgcgcaggtaacacggtgagcttgggcagtgggggcgac
actaccctcaaaggcgcgaccgtgacgggcaacactgtttccgccaaggtcggtggtgac
ctgaatattgaaagcctgcaggacaccagcaagtacgacagcaagcagcaaagtgctggc
gtgagtgtgagcgtgtgcgttccgccgttctgctatggggccagcagtgcgagtggaaac
gttgcgagttccaaggtcaagggggactttgcgagcgtgaccgagcagtcagggatcaag
gctggcgagggtggtttcgatgtggcggtgaagggtaataccgatctgaaaggcggcgtc
attgaaagcagccagaaggccattgacgacaacaagaaccgcctgacgaccgggaccttg
acgcagagctcaattcagaatcatgacaactatgatgcgagcggttttagcgtcagtggt
tctgtatcagggaagatgggggaccagacaccgaccaatagcatgtcggatgcgaacagg
accgcggctaccagcaaaacgaaaccgggcggcagttcgggcatcagcagcaatagcggc
agccaaggtagtaccaccctctctggcatcagtggtggtgcgctcaacatcaccaacgat
gacgcgcaacgtgcgaagactggacaaagcgcggccgaagccgttgctagcgtcaatcgt
gatgtcagcacggacaaggacactagtggagcgctgaccaagtcgtgggatggcggaaaa
ctgatgcagcagacgcaggctgaagtgcaaattacggcggcctttggttcggcggcggcg
aaagctatcggagattatggagacctgcaactgaagcaagcgcgagcgcttcgcaatgcc
gcagcttctgagccagatgcggagaagcgcgatgcgatgctctccaatgcccagagcata
gaagataaatggggcgagagcgggaccgctcgtgtcggtgcccacgctctcgttggggga
ataacgggtgggctacagggcgccttgggagctggtaccagtgcggccttggcgtcgtca
ctcaataatttaatgaacaatgcagatttgcctgagcctcttaagcagagcgtaggtgcg
gcattggcaagtgcggctggcgctttagccggcggcgctaatggtgctgcggcagcgttc
aatgaggatgtgaacaatcggcagtcgaatcatggggagcaactttggattaagaaacag
gcaaacggggatgccaagaaagaggccagattagctgcggcagcttgtgcggtggtgaac
cgccccgactttcgcggaggctatttggtttaa
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integrated database retrieval system
