Herbaspirillum rubrisubalbicans: Hrubri_3913
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Entry
Hrubri_3913 CDS
T04238
Symbol
cheD
Name
(GenBank) methyl-accepting chemotaxis I MCP-I serine chemoreceptor transmembrane protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02020
Two-component system
hrb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hrubri_3913 (cheD)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hrubri_3913 (cheD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hrb02035
]
Hrubri_3913 (cheD)
Bacterial motility proteins [BR:
hrb02035
]
Flagellar system
Chemotaxis proteins
MCPs
Hrubri_3913 (cheD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
4HB_MCP_1
HAMP
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
ALU91063
LinkDB
All DBs
Position
complement(4612157..4613782)
Genome browser
AA seq
541 aa
AA seq
DB search
MFSKLSIRSRLIFVIAFLALLLVASGVLGVISLRSTNAQMGSLYEDRLVALSQLERMSAA
LDAARNGISTSIVGDSGDIDANMDKIEKALKANDAVVMKYQQTPLSSEERALLEKMIAQR
QKFVVEGIKPATEALRNRDFQGAIELYGGVMLKLYAEAHATLAQLMDLQRSVGREMHEQA
QQRYQTLLVIMGVAMLAGLVVALLMGGLLVRAISRPLQRAVKVAQGVAAGDLTQRIEVHS
QDETGQLMQALQQMNDNLQGIVGQVRLSTDTIATASSEIAHGNLDLSSRTEQQAGALEET
ASAMEQLTSTVRANAENAQQAKQLAHSASEVAVRGGQVVRQVVDTMSSINQSSNKIVDII
SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKVLIDDSV
TRVGSGSALVAQAGATIDEVVHSVQQVSAVVTEISAAGQEQSQGIEEVNRAITQMDESTQ
QNAALVEQAAAAAQAMQEQAARLSAAVSVFRLNGPALPGPAAGVSAQAAMALPGKEELLL
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtaaattaagcatcaggtcgcgcctgattttcgtcatcgcttttctcgccttg
ctgctggtggcctcgggagtattgggggtgatcagcctgcgttctaccaacgcccagatg
ggttcgctctatgaagaccgcctggtggccttgtcccaactggagcgcatgtcggccgcg
ctggatgcggcgcgtaacggtatttccacctccatcgtcggcgactccggtgacatcgac
gccaatatggacaagatcgaaaaagccctcaaggccaatgacgccgtcgtcatgaaatac
cagcagacgccgctctccagcgaggaacgggcactgctggaaaagatgattgcgcagcgc
cagaagttcgtggtcgagggcatcaagccggccaccgaggccttgcgcaatcgcgacttc
cagggggccatcgagctctatggcggcgtcatgctcaagctctatgccgaggcccatgcc
acgctggcgcaattgatggacttgcagcgcagcgtcgggcgcgagatgcatgaacaagcc
cagcagcgctaccagaccctgctggtgatcatgggcgtggccatgctggccggcctggtg
gtggcgttgttgatggggggcttgctggtccgtgccatctcgcgcccattgcagcgcgcc
gtcaaggtggcacagggggtggctgccggcgatctgacccagcgcatcgaagtgcatagc
caggatgaaaccggccaactgatgcaggccctgcagcagatgaacgacaacctgcaaggc
atcgtcggccaggtgcgcctgagcacggacaccattgccaccgcctccagcgagatcgcg
cacggcaacctcgacctgtcttcgcgcaccgagcaacaggccggcgctctggaagagacc
gcctcggccatggaacaactgacctccaccgtgcgcgccaatgccgaaaacgcccagcaa
gccaagcaactggcgcactcggcttcggaagtggcagtgcgcggtggtcaggtggtgcgc
caagtggtcgacaccatgagttcgatcaaccagtcctccaacaagatcgtggacatcatc
agcgtgatcgatggcatcgccttccagaccaatatcctggccttgaatgccgccgtggaa
gccgcgcgtgccggcgagcaggggcgggggtttgcggtggtggcttccgaagtgcgttcg
ctggcccagcgctcggccgccgcggccaaggaaatcaaggtgctcatcgatgattcggtc
acccgtgtcggtagtggcagtgccctggtggcacaggctggcgcgaccatcgatgaagtg
gtccacagtgtgcagcaggtcagcgccgtggttaccgagatcagtgcggctggtcaggag
cagagccagggcatcgaggaagtcaaccgcgccatcacccagatggatgaaagcacccag
cagaacgcggcgctggtggagcaggcggccgctgccgcgcaagccatgcaggaacaggct
gcgcgcctgtcggcagcggtcagcgtgtttcgcctgaatggcccggcgctgcccggcccg
gcagcaggcgtgagcgctcaggcggccatggccttgccgggcaaggaagaactgctgctg
cactga
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