Herbaspirillum rubrisubalbicans: Hrubri_3916
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Entry
Hrubri_3916 CDS
T04238
Symbol
kdsC
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00541
Biosynthesis of various nucleotide sugars
hrb01100
Metabolic pathways
hrb01250
Biosynthesis of nucleotide sugars
Module
hrb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Hrubri_3916 (kdsC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Hrubri_3916 (kdsC)
Enzymes [BR:
hrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
Hrubri_3916 (kdsC)
Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Lipid A
Hrubri_3916 (kdsC)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
Hydrolase_6
HAD
Motif
Other DBs
NCBI-ProteinID:
ALU91066
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Position
4617351..4617905
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AA seq
184 aa
AA seq
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MTTPTFASTLPALALAKAATIRLMIFDVDGVLTDGGLFYGEEGEAFKRFNALDGHGIKLM
QQYGTAAAIITARQSPYVLRRARDLGIAHVFQGVHDKRQAFEQLLQQLQLAPAACGYLGD
DIIDLPVLTRVGFKACVANGHREVKSRCDYVTQASGGHGAVREICDLVLAAQGNYEAALA
PYLA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcccaccttcgccagcaccctgcccgcgctcgcgctggccaaggctgcgacc
atccgcctgatgatcttcgatgtcgatggcgtgttgaccgatggcggcctgttctatggc
gaagagggtgaagccttcaagcgcttcaatgccctcgacggccacggcatcaagctgatg
cagcaatacggtacggctgcggccatcatcactgcgcgccagtcgccctacgtgctgcgc
cgcgcgcgcgacctgggcattgcccacgtgttccagggcgtgcacgacaagcgccaggcc
ttcgagcaattgctgcagcaactgcagctggcacccgctgcttgcggctatctgggtgac
gacatcatcgacctgccggtgctcacgcgcgtgggcttcaaggcgtgcgtagccaatggt
caccgcgaggtgaagtcgcgctgcgactatgtgactcaggccagcggcggccatggcgcc
gtgcgcgaaatctgcgacctggtgctggccgcccagggtaactacgaggcggcgctggcg
ccgtacctggcatga
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