Herbaspirillum rubrisubalbicans: Hrubri_3954
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Entry
Hrubri_3954 CDS
T04238
Symbol
pcaF
Name
(GenBank) beta-ketoadipyl-CoA thiolase
KO
K07823
3-oxoadipyl-CoA thiolase [EC:
2.3.1.174
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00362
Benzoate degradation
hrb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Hrubri_3954 (pcaF)
Enzymes [BR:
hrb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.174 3-oxoadipyl-CoA thiolase
Hrubri_3954 (pcaF)
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GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase_C_1
Motif
Other DBs
NCBI-ProteinID:
ALU91104
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Position
complement(4653185..4654387)
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AA seq
400 aa
AA seq
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MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA
GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM
TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRQD
QDQFAVRSQAKAAAAQANGTLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV
VKPDGTVTAGNASGVNDGACALLLASAEAVEKYQLKPRARILGMATAGVAPRIMGMGPAP
ASKKVLAQLGMSIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM
SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatttatctgtgacgccatccgtacccccatcggccgctatggcggcgcg
ctcaaggacgtgcgggccgatgacctgggcgccgtgccgctgcgcgcgctcatggagcgc
aatccgcaggtggactggaaggcggtcgacgatgtgatcttcggctgcgccaaccaggcc
ggtgaagacaaccgcaacgtggcgcgcatgtcgctcttgctggcaggcctgccgcaggaa
gtgccgggcagcaccatcaaccgcctgtgcggttccggcatggatgcgctgggcaccgcc
gcgcgcgccatcaagtccggcgaaacccagttgatgatcgccggtggcgtggaatcgatg
acccgcgcccccttcgtcatgggcaaggccgacagcgccttttcgcgccaggccgcgatc
caggacaccaccatcggctggcgcttcgtcaatgcgctgatgaagcagaagtacggggtg
gatgctatgcccgagaccgccgaaaacgtcgccgtcgatttcaaggtcagtcgccaagac
caggaccagttcgccgtgcgcagccaggccaaggccgcagcggcgcaagccaatggcacc
ctggcccaggaaatcgtgccggtggtgatcccgcagaagaagggcgaccccatcaccgtg
acccaggatgaacatccgcgagccaccagcatggaagccctggcccgcctgaagggcgtg
gtcaagccggacggtaccgtcacggcaggcaatgcctcgggcgtcaacgatggcgcctgt
gcgctgctgctggccagtgccgaagcggtggaaaaataccagctcaagccgcgcgctcgc
atcctgggcatggccaccgctggtgtggcgccccgcatcatgggcatggggccggccccg
gccagcaagaaggtgctggcgcaactgggcatgagcattgatcagatggacgtgatcgaa
ctcaatgaagccttcgcttcgcaaggcctggccgtactgcgtgagctgggcgtggccgat
gacgatgcgcgggtgaaccccaatggcggcgccatcgccctgggccatccgctgggcatg
agcggcgcgcggctggtcactaccgccacctatcagctggagcgcaccggtggccgctac
gcgctgtgcaccatgtgcatcggcgtggggcagggcatcgcgatggtgatcgaacgcgtc
taa
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