Herbaspirillum rubrisubalbicans: Hrubri_3977
Help
Entry
Hrubri_3977 CDS
T04238
Name
(GenBank) peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins protein
KO
K17733
peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrb01002
]
Hrubri_3977
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hrb01011
]
Hrubri_3977
Peptidases and inhibitors [BR:
hrb01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Hrubri_3977
Peptidoglycan biosynthesis and degradation proteins [BR:
hrb01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Hrubri_3977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15_4
VanY
Peptidase_M15_2
Motif
Other DBs
NCBI-ProteinID:
ALU91127
LinkDB
All DBs
Position
4682618..4683457
Genome browser
AA seq
279 aa
AA seq
DB search
MLFLLIAAYLLATGFAMWLLLFPSGRVRTLRFLNARLSGLRNRWERWNRTSDEVIAGTTS
NLRSSLTAGVNYVRNNYVITSTIVVLLVGPAIIAYLLSGKSMLHGFEDTDHVTNSQIAEL
LKGEQLVPPPPLPPEMFTTAEVVQVRPMLVNASRNWQLLNPEYAQRLLLVFKIMKEKHGY
DMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM
EGYRLYGEVAESVGLTWGGRWKLMDFGHTEYRMPGVMKR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttccttctcattgctgcctacctgctggccaccggcttcgcgatgtggttgttg
ctttttccatctgggagggtacggaccctacggttcctcaatgcccgtctttccggcctg
cgcaaccgctgggagcgatggaacagaacaagcgatgaggtgattgcagggacaacatcc
aatctcaggagttccctgacagcgggagtgaactacgtgcgcaacaattacgtaatcaca
tccactatcgttgtcttgttggtcggcccggcaatcattgcctatctattgagcgggaaa
tccatgttgcatggattcgaggataccgatcacgtaaccaattctcaaatcgcggaactt
ttaaagggcgagcaactcgtaccaccgccgcccttgccgccggaaatgtttaccaccgca
gaagtggtccaggtccgtccgatgctggtcaatgccagccgcaactggcaactgctcaat
cctgaatacgcccaacgcctgctcctggtcttcaagatcatgaaggaaaagcatggctac
gacatggcgctcatcgagggttatcgcagtccagaacgccagaacatgctggctggcatg
ggcggcaatgtcaccaacgcagccgccttccagagttatcaccagtacggactggccggc
gactgcgcctttgtcaggaatggcaagctggtgatcagcgaaaaggatccatgggccatg
gaaggctatcgcctctatggcgaggtcgccgagtcggtaggactgacctggggtggccgc
tggaagctgatggacttcggccataccgaataccgtatgccgggcgtcatgaagaggtaa
DBGET
integrated database retrieval system
