Herbaspirillum rubrisubalbicans: Hrubri_3984 Help Entry Hrubri_3984       CDS       T04238                                  Symbol clpB Name (GenBank) ClpA/B-type chaperone protein   KO K11907   type VI secretion system protein VasG Organism hrb  Herbaspirillum rubrisubalbicans Pathway hrb03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:hrb00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Hrubri_3984 (clpB)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:hrb02044]     Hrubri_3984 (clpB) Secretion system [BR:hrb02044]  Type VI secretion system   Imp/Vas secretion system core components    Hrubri_3984 (clpB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA Clp_N AAA_5 ClpB_D2-small AAA_22 AAA_16 NBD_SMAX1 nSTAND3 AAA_25 AAA_7 Sigma54_activat AAA_29 NACHT AAA_30 TniB T2SSE Zeta_toxin SLFN-g3_helicase SRP54 DUF815 Peptidase_C58 Motif Other DBs NCBI-ProteinID:  ALU91134 LinkDB All DBs Position complement(4692294..4694969) Genome browser AA seq 891 aa AA seqDB search MGINLKSLISKLNDTARIATERAATLCMSRGQYEVDLEHLFLALLDQPQSDFSLIARRSG ISIDSLQADLEREIATFKNGNTRTPVLSPHLQTLFEHAWLIASLDGGNPAIRSSHLLLAL LTQSELSQLAYRGSKLFAKFKVAELKHDLYKLTEGSVEALAESVSGQGPAGDMNESADPV GEMNARPSGKTPALDQYTTQLTQRARDGKIDPVIGRDGEIRQAVDILLRRRQNNPILTGE AGVGKTAVVEGLALRIAAGDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKNVIDEVK KSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDA ALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAISEAVRLSHRYISGRQLP DKAISVLDTACAKVALGQNATPALLEGVSRRLERIAAEMAALEREAASGSLHEARLTELR SQHEAALAEQTDLKARWVQERGLNERIQQARAALEDANRNGQTGQDADAARAELKQLLDE LKQHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLRERVLGQPQA TSAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINMSE YQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVFDK GVMDDGEGREIDFKNTIIILTSNVASAQMMQACLNKTAQELPTPDELDALIRPQLVKAFK PAFLGRLKVIPYYPIADEVLVEIIKLKLGRIAKRIAENHKAEFSYDKALVEAVLARCTEV DSGARNVDNILNGSLLPEIAESVLARMAEGQSISRIKVSASKKGDFKYTIQ NT seq 2676 nt NT seq  +upstreamnt  +downstreamnt atgggcatcaacctgaagtcactgatcagcaaactcaacgacaccgcccggatagccact gaacgcgccgcgacgctgtgcatgtcccgtggccaatatgaggtggacctggaacacctg ttcctggccctgctcgaccagccacaatcggatttcagtctcatcgcgcgccgcagtggc atcagcatcgacagtctgcaagccgacctcgaacgtgaaatcgccacctttaagaatggc aatacccgcaccccggtcctgtcgccgcatctgcagaccttgttcgaacacgcctggttg atcgcctcgctggacggtggcaatccggccatccgtagcagtcacctgctgctggcactg ctgacccagagcgagttgtcgcaattggcctatcggggttccaagctgtttgccaagttc aaggtcgctgagctcaagcatgatctgtacaaactgaccgaaggttccgtcgaagccctt gcagaaagcgtttccgggcaaggccccgcgggcgatatgaacgaaagcgctgatccggtc ggggagatgaatgcgcgcccttccggcaagaccccggcgctcgaccagtacaccacccag ctcacgcaacgcgcccgcgatggcaagatcgacccggtgatcgggcgcgatggtgagatc cgtcaggcggtcgacatcctgctgcgccgtcgccagaacaatcccatcctcactggcgaa gccggcgtgggcaagaccgccgtggtcgaaggcctggccctgcgcattgccgccggtgac gtaccgcaggccttgcagggggtggaaattcatacgctggacatgggactgctgcaggcg ggggcgagcgtgaagggcgagttcgagaaccgcctgaagaacgtgatcgatgaggtcaag aagagcccgcatccgatcatcctgttcatcgacgaggcccacaccatgatcggtgccggt ggccaagccggacagaatgacgcggccaacctgctcaagccagcgctggcacgcggggag ttgcgcaccattgccgctactacttggagtgaatacaagaagtatttcgaaaaggatgcc gcactggcccggcgcttccaggtcatcaaggtggaagaaccgaccgaagaggtggcctgc gccatgttgcgggcgatggcgcccttgatggaaaagcacttcggcgtgcgcgtctatgac gaagcgatcagcgaagcggtccgtctgtcgcaccgctacatcagtggtcggcagttgccg gacaaggccatcagcgtgctcgataccgcctgcgccaaggtcgcgctcgggcagaatgcc acgccggcactgttggaaggggtaagccgccggctggagcgcatcgctgccgagatggcg gccctggagcgtgaagcggccagcggatcgctgcatgaagcgcgcttgactgagctgcgt tcccagcatgaagcagcgttggcggaacaaacggatctcaaggcgcggtgggtgcaggaa cgcggactcaacgagcgtatccagcaagcccgcgccgcattggaagacgccaaccgcaac ggtcaaaccggccaggatgccgatgcagcgcgggccgaactcaagcaactgctggacgaa ttgaagcagcatcaaggcgagacgccgatggtgccggtccaggtcgatggtcatgtcgtg gccgagattgtcgccggttggacgggtatcccgttgggcaagatggtcaaggatgagatc aagaccgtgctcggcctggatgccttgctgcgcgagcgcgtattgggccaaccccaggcc acctcggcggtggcccagcgcgtgcgcacctcgcgcgccaacctggacgacccgggcaag cccaagggcgtgttcctcttcgttggaccgtccggcgtgggcaagaccgagacggccctg gccctggccgatgtgctctatggcggcgagcgcaagctcatcaccatcaacatgagcgaa taccaggaggcccatacggtgtccggcttgaagggttcaccgcctggttatgtcggttat ggcgagggtggcgtgctcaccgaagcggtgcggcgtaacccgtatagcgtcgtgctgctc gatgaagtggaaaaggcccacccggatgtcctggaactgttcttccaggtcttcgacaag ggcgtgatggatgatggcgaaggtcgcgagatcgacttcaagaacaccatcatcatcctc accagcaatgtggcgtcggcccagatgatgcaagcctgtctgaacaagacggcgcaggag ctgcccaccccggatgagctggacgccctgattcgcccgcaactggtgaaggcgttcaag cccgccttcctcgggcgactgaaggtgatcccttactacccgattgccgacgaagtgctg gtggaaatcatcaagctcaagctcggacgcatcgccaagcgcattgccgagaaccacaag gccgagttcagctacgacaaggcgctggtcgaggctgtgttggcgcgttgtaccgaggtt gattcgggcgcgcgcaatgtggacaacattctcaatggcagcctgttgccggaaatcgcc gagagcgtactggcgcgcatggctgaagggcagagcatcagccgtatcaaggtgtcggcc agcaagaagggcgatttcaagtacaccatccaataa

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