Herbaspirillum rubrisubalbicans: Hrubri_4111
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Entry
Hrubri_4111 CDS
T04238
Name
(GenBank) PP-loop superfamily ATPase protein
KO
K06920
7-cyano-7-deazaguanine synthase [EC:
6.3.4.20
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00790
Folate biosynthesis
hrb01100
Metabolic pathways
Module
hrb_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Hrubri_4111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_4111
Enzymes [BR:
hrb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.20 7-cyano-7-deazaguanine synthase
Hrubri_4111
Transfer RNA biogenesis [BR:
hrb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Hrubri_4111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
QueC
ThiI
DUF7411
Motif
Other DBs
NCBI-ProteinID:
ALU91260
LinkDB
All DBs
Position
4817356..4818135
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AA seq
259 aa
AA seq
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MLVPVSLPALSKNMSATPPIAPTLNTQSALVLFSGGQDSTTCLAWALSRYARVETIGFDY
GQRHAIELQVRPALLQKMQTFSPDWQARLGEDHMIDLSLIGKISDTALTRDVAIAMQDNG
LPNTFVPGRNLLFMTVAATLAYRRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGM
ATQLKVETPLMWIDKADTWSLAESLGGSALVDLIRADTHTCYLGERGQLHDWGHGCGKCP
ACELRARGYQQYAARKTTG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgtccccgtctcccttccagccttgagcaagaacatgtccgctacgcctcccatc
gcccccaccctcaacacccaaagcgccctggtgctcttttccggtggccaggattccacc
acctgcctggcctgggcgctgtcgcgctatgcgcgggtggaaaccatcggcttcgactac
ggccagcgccacgccatcgagctgcaagtgcgcccggccctgctgcaaaagatgcagacc
ttctcgcccgactggcaagcccgcctgggcgaagaccacatgatcgacctgtcgctgatc
ggcaagatttccgacacggcattgacccgcgatgtcgccatcgccatgcaggacaatggt
ctgcccaataccttcgtgcccggtcgcaacctgttgttcatgacggtggccgccacgctg
gcctatcgccgtggcttgaacgtgctggtgggcgggatgtgcgaaaccgatttctcgggc
tatcccgattgccgcgacgacaccatgaaggcgctgcaggtggccctgaacctgggcatg
gccacgcaactgaaagtggaaacgccgctgatgtggatcgacaaggccgacacctggtcg
ctggccgaatcgctgggaggcagcgcgctggtggacctgatccgcgccgatacccatacc
tgctacctgggcgagcgcggccagttgcatgactggggccatggctgcggcaagtgcccg
gcctgcgagttgcgcgcacgcggctaccagcagtacgcggcacgcaaaacgaccggctga
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