Herbaspirillum rubrisubalbicans: Hrubri_4220
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Entry
Hrubri_4220 CDS
T04238
Symbol
xerC
Name
(GenBank) site-specific integrase/recombinase protein
KO
K03733
integrase/recombinase XerC
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrb03036
]
Hrubri_4220 (xerC)
Chromosome and associated proteins [BR:
hrb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Hrubri_4220 (xerC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
ALU91367
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All DBs
Position
4948224..4949234
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AA seq
336 aa
AA seq
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MDAAASSLIGRYLSFLRSQRKLSPHTLENYGRDLQELRALLAPADDHDGVADSTLPHVSQ
PQIRKCAARLHARGLNARSISRKLSAWRGFFAWLALEEGMALPANPVDGVKPPKKSKPLP
KALAADDAIRLVSHADPARDPASTLAACNRAMFELLYSSGLRVSELVGIDLADVREGRYE
SAGWIDLAEAEVTVTGKGGKKRKVPVGKAALQAIQDWLPLRAGLVRADGGPDGHALFLNE
RGARMSPRVTQLRLKAHGKGVEMATDVHPHMLRHSFASHVLQSSGDLRAVQEMLGHASIT
ATQVYTALDFQRLAQVYDQAHPRAHKGGKGGKGDNK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgcggcctcttccctgatcggacgctatctttccttcctgcgcagccagcgc
aagctctcgccgcatacgctggaaaactacgggcgcgacctgcaggaattgcgcgccttg
ctggcgccagcggacgaccacgacggtgttgccgacagcaccctgccacacgtcagccag
ccccagatccgcaaatgcgccgcccgcttgcacgcacgcggcctcaatgcccgctcgatc
tcgcgcaagctgtcggcctggcgcggattctttgcctggctggcgctggaagagggaatg
gcattgccggccaacccggtcgacggcgtcaagccgcccaagaaaagcaaacccctgccc
aaggcgctggctgccgatgatgccatccgcctggtgtcgcacgccgatccggcgcgcgat
cccgcctctacgctagcggcctgcaaccgcgccatgttcgagctgctctattccagcggt
ttgcgggtttccgaactggtgggtatcgacctggccgatgtccgtgaaggccgttatgaa
tcagccggctggatcgacctggccgaagccgaggtcacggtcaccggcaagggcggcaag
aagcgcaaggtgccggtaggaaaagccgccctgcaggccatccaggattggctgcccttg
cgcgccggcctggtcagggccgatggcgggccggatgggcacgcgctgtttctcaatgaa
cgcggggcacgcatgtcgccccgggtcacccagttgcgcctcaaggcccatggcaaaggt
gtggaaatggccaccgacgtgcatccgcacatgctgcgccactcgtttgcctcgcacgtg
ctgcaaagctcaggcgacctgcgggcggtccaggaaatgctgggccacgcctccatcacc
gccacccaggtctataccgcactggacttccagcgcctggcccaggtctatgaccaggcc
catccgcgcgcccataaaggcggtaaaggcggcaaaggcgacaacaaatag
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