Herbaspirillum rubrisubalbicans: Hrubri_4300
Help
Entry
Hrubri_4300 CDS
T04238
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase protein
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00521
Streptomycin biosynthesis
hrb00523
Polyketide sugar unit biosynthesis
hrb00525
Acarbose and validamycin biosynthesis
hrb00541
Biosynthesis of various nucleotide sugars
hrb01100
Metabolic pathways
hrb01110
Biosynthesis of secondary metabolites
hrb01250
Biosynthesis of nucleotide sugars
Module
hrb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Hrubri_4300 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Hrubri_4300 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Hrubri_4300 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Hrubri_4300 (rfbB)
00525 Acarbose and validamycin biosynthesis
Hrubri_4300 (rfbB)
Enzymes [BR:
hrb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Hrubri_4300 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Cellsynth_D
Motif
Other DBs
NCBI-ProteinID:
ALU91446
LinkDB
All DBs
Position
5039325..5040404
Genome browser
AA seq
359 aa
AA seq
DB search
MIFVTGGAGFIGSNFILDWLRDAQAEAVLNIDKLTYAGNPYNLSSVADDARYAFVQADIC
DESAMATLLARYRPRAILHFAAESHVDRSILNPDEFIRTNVNGTFNLLNKALRYWQALPA
QEQADFRFLHVSTDEVYGSLEPDDAPFCETTPYAPNSPYSASKAASDHLVRAYHHTYGLP
TLTTNCSNNYGPYHFPEKLIPLVISNALAGNPLPIYGDGQQIRDWLYVTDHCAAIRTVLA
RGRVGQTYNIGGWNEQTNLHVVHTLCDTLDQLQPRSQGSYRELITFVKDRPGHDRRYAID
ARKLERELGWKPGETFQSGIHKTVQWYLANGEWVAQVRSGAYLNWLQQQYGDHPAGTSI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgtcaccggcggggccggcttcatcggcagcaacttcatcctcgactggctg
cgcgacgcgcaagccgaggctgtactcaacatcgacaagctgacctatgccggcaatccg
tataacctgagttcggtcgccgacgatgcgcgctatgccttcgtgcaggccgacatttgc
gacgaaagtgcaatggccacgctgctggcgcgctatcgtccccgcgccatcctgcacttt
gccgcagagagccacgtcgatcgatcaatcctcaatcccgacgaattcattcgcaccaac
gtcaacggcaccttcaacctgctcaacaaggctctgcgctattggcaggcgctccctgcg
caggagcaggccgacttccgtttcctgcacgtttctaccgacgaggtctatggcagcctg
gagccggacgatgcgcccttctgcgaaaccacgccatatgcgcccaacagcccctactcg
gcctccaaggcggcttcggatcatctggtgcgggcctatcaccatacctatggcctgccc
acactgaccaccaattgctccaacaactacggcccctaccacttccccgaaaaactcatc
ccgctggtgatttccaatgcgctggcaggcaaccccctgcccatctatggtgatggacaa
cagatccgcgactggctctacgtcaccgatcactgcgcagcgatccgtaccgtgctggcc
cgtggtcgggtcggccagacctataacatcggcggctggaacgaacagaccaacctgcac
gtagtgcatacgctatgcgatacgctggaccaactgcaaccgcgctcgcaaggcagttac
cgcgaactgatcaccttcgtgaaggatcgtcccgggcatgatcgtcggtatgccatcgat
gcccgcaagctggagcgggagctgggctggaagcccggcgagaccttccagagcggcatt
cacaagacagtacagtggtatctggccaatggcgagtgggtggcgcaggtgcgctcgggc
gcctatctgaactggctgcaacaacaatatggggatcatcctgcggggacatcgatatga
DBGET
integrated database retrieval system
