Herbaspirillum rubrisubalbicans: Hrubri_4379
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Entry
Hrubri_4379 CDS
T04238
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_4379
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_4379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_4379
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hrubri_4379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
TAT_signal
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
ALU91524
LinkDB
All DBs
Position
5131567..5132889
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AA seq
440 aa
AA seq
DB search
MSPEEQCDLMQPATGGPAKEMSRRKFLHYAGALGAAVAGASPAAMAASEKVIRIGYVTPK
TGPFAPFSEADDFILAQVRKAVEGGIDIGNTRYRVEILVRDDQSSPDRASNLAAELINKD
NVDLMLAQVALGPNVAQQCELNGVPCISTMGPWEAWMFPIKGNPATGFKNIFHFFWGVDD
IAAVYLDIWKDLPVSRSVGMCWSNDVPGNAMGDRKLGMPPYFSKAGYKLVEAGKFAVGTD
DFSTHIQLFKRENVDIVTGLFNPPEWASFVKQSAQMGYRPKVATIAKALLFPAGVDALGA
KADGMSTEIWWTPAYPFHSSITGQSAKQLGDSYVSATRRAWTQPLGVVHALFETGLAALK
ASGNPNNPKAVADAIRTMKLDTVIGRLDFTSSGIKNVSKIRVAGGQWRLNGAGKPEIFVT
NNRTAPEIPVQRPFELLKSV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagaagaacagtgtgatctgatgcaacccgccaccggcgggccagcaaaggaa
atgtcccggcgcaaattcctgcactacgccggagccttgggcgcagcagtcgccggagcc
agtccggcagccatggcggcgagcgaaaaagtgatccgcatcggctatgtcaccccaaaa
acaggcccttttgcaccattttcggaagctgacgatttcattttggcgcaggtccgcaag
gccgtcgaaggtggcattgacattggtaacacgcgttaccgtgtcgaaatcctcgtacgc
gatgaccagagcagcccggaccgggcatcgaacctggccgccgaactgatcaacaaggac
aacgttgatctgatgctggcgcaggtcgcgctgggacccaacgtcgcacagcagtgtgag
ctcaacggggtgccctgtatttccaccatgggtccctgggaagcatggatgtttcccatc
aaaggcaacccggcaaccgggttcaagaatatctttcacttcttctggggcgtcgatgat
attgccgccgtctatctcgatatctggaaggacttgccggttagccgttcggtaggcatg
tgctggtcgaacgatgtgccgggcaacgcaatgggtgatcgcaagctgggcatgccaccc
tacttttcgaaggctggctacaagcttgtcgaagccggcaagttcgccgtcggaactgac
gatttctccacacacattcaactcttcaagcgggaaaacgtcgacatcgtcacaggtctg
ttcaatcctcctgagtgggccagcttcgtgaagcagtcagcccagatgggttaccggccc
aaagtggcgaccatcgccaaggctctgctgtttcctgccggagtcgatgcactgggtgca
aaggcagatggcatgtccactgaaatctggtggactccggcctatccattccactcgagc
atcaccgggcagagcgccaagcagctcggcgacagctacgtatcggcgacacgtcgtgca
tggacccagccactgggagtggtccacgcattgttcgagacaggtctcgcagcactcaag
gcaagcggtaaccccaacaatcccaaggcagtcgccgacgccatccgcaccatgaagctc
gataccgtcataggccgcctcgactttacctccagcggtatcaagaacgtatcgaagatc
cgcgtggcgggtgggcaatggcgcctcaatggagcgggcaagccggagattttcgtcacc
aacaaccgtacggcgcccgagatcccggtacagcgtccgtttgaactgctcaagtcggtc
tga
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