Herbaspirillum rubrisubalbicans: Hrubri_4439
Help
Entry
Hrubri_4439 CDS
T04238
Symbol
cirA
Name
(GenBank) TonB-dependent siderophore receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_4439 (cirA)
Transporters [BR:
hrb02000
]
Other transporters
Pores ion channels [TC:
1
]
Hrubri_4439 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Chitin_bind_4
Motif
Other DBs
NCBI-ProteinID:
ALU91584
LinkDB
All DBs
Position
complement(5207682..5209757)
Genome browser
AA seq
691 aa
AA seq
DB search
MSKLSGRRPRHLHRVRPIVKLTALSGLLALGAAPWALAQSASAAEDSSLSLGTVEVNARR
SGPLQLNNVLTSVDLIGADHIQQQQVQYNWELFAQSPGVMLTQFRQGNESGKLSLRGFNG
EGEVNAVKLLIDGVPSNDNAGGMPFLGTLLPLNIERIEVVRGTNDARYGLHNIAGNINIL
TREGGNYDEARLTYGSFNTRQLQVVKGVENGNWSQNYFLGYEKSDGYRQHAQGENIAFSG
KWFYTSDDGRYRTGLSIRHANGYAQEPGYLTAQDARRDPTASYAYAQSDGGNRQMDQVSL
HFDAEVDAQLSLATKLYLNRVRDQRWLRYSSTTSQQERIIDETHYGLLSTATYRPQWKAL
AGLNDLALEGGFNLERQEDQSPRYSTVNKVRVVQTRDHHFVFDTVGAYVQAVITPVSSLR
IIPGYRVDHVGGRFNDPSRGVSYGIQDYGIIKQPKLSLVYSPFQQASLYANWGRTFQVGA
GAAAYKSNNNDLRPSINDGWETGIKFTPADWLDGRVAVWEQRASDEVKRRLNDPTGDSEN
VGRTKRSGVDLQLNLRAGKRTTVWLAYSRQKSEIVTPDPSAPDTMGKEIDHVPRAVYSGG
VDYQASAALKLSASVNGQGSYYLTTANTGGKFGGYTLFNASATYQVTPSLSLELQLKNLA
NRYYEYVWINDQTRHAPGDGRAVYVSANVKY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactttccggccgcaggcccaggcatctgcatcgcgttcgtcccatcgtcaaa
ctcaccgccctgtccggcttgctggcactgggtgcagcaccctgggcgctggcccagtcg
gccagcgcggccgaggattcctcgctctcgctgggcacggtggaagtcaatgcgcgccgc
agcggcccgctgcaactcaacaatgtgctgacctcggtggacctgatcggtgccgatcac
atccagcaacaacaggtgcaatacaactgggaactgtttgcgcaatcgccgggcgtgatg
ctgacccagttccgccagggcaacgagtcgggcaagctatccttgcgtggcttcaatggc
gaaggtgaggtcaatgcggtcaagctgctcatcgatggcgtccccagcaatgacaatgcg
ggcggaatgcccttcctggggacgctgcttccgctgaacatagaacgcatcgaagtcgtg
cgcggcactaatgatgcgcgctacggcctgcacaacatcgccggcaacatcaacatcctg
acccgcgagggtggcaactatgatgaggccaggctgacctatggcagcttcaacacgcgc
cagctgcaggtggtcaagggcgtggagaacggtaactggtcgcagaactatttcctcggt
tatgaaaagtccgatggctatcgccagcacgcgcaaggcgagaacatcgccttttccggc
aagtggttctacaccagcgacgacggacgttaccgcaccggtctgagcatccgccacgcc
aatggctatgctcaggaaccgggttacctgaccgcccaggatgcacgccgtgatcccact
gcgtcctatgcctatgcccagtccgacggcggcaaccgccagatggaccaggtcagcctg
catttcgatgccgaggtcgatgcgcaattgtcgctggccaccaagctctacctgaaccgc
gtgcgtgaccagcgctggctgcgctattcctccaccacctcgcagcaggaacgcatcatc
gatgaaacccactatggtctgttgagcacggccacctatcgtccccagtggaaggcactg
gcgggcctgaacgacctggcgctggagggtggcttcaacctggagcgccaggaagaccag
agcccacgctacagcaccgtcaacaaggtccgcgtggtgcagacgcgtgatcatcatttc
gtcttcgataccgtgggcgcgtatgtgcaggcggtgatcacgccagtctcctccctgcgt
atcattcccggctatcgggtcgatcatgtggggggccgcttcaacgatccttcgcgcggg
gtgagctatggtatccaggactacggcatcatcaagcaacccaagctgagcttggtgtat
tcccccttccagcaagccagcctgtatgccaactgggggcgtaccttccaggtcggtgcc
ggcgcggccgcctacaagtccaataacaatgacctgcgtccttccatcaatgatggctgg
gaaaccggtatcaagttcacgcccgccgactggctggatgggcgcgtggccgtttgggag
caacgcgcctccgatgaagtcaagcgacgtctcaacgaccccaccggcgactccgaaaac
gtcggtcgcaccaagcgcagtggcgtcgatctgcaactcaacctgcgcgccggcaagcgc
accaccgtatggttggcctattcacgccagaagtccgagatcgtcacgcccgaccccagc
gcccccgataccatgggcaaggaaatcgaccacgtgccgcgtgccgtctattccggtggc
gtcgattaccaggccagcgccgctctgaagctctcagcctcggtcaatggacagggcagt
tactacctcaccaccgccaacacaggcggcaagttcggcggctatacgctgttcaatgcg
agcgccacctatcaggtcacgcctagcttgagcctggagttgcagctcaagaacctggct
aatcgctactatgaatatgtgtggatcaatgaccagacccgtcatgctcccggggatggt
cgggcggtgtatgtctcggccaatgtgaagtattga
DBGET
integrated database retrieval system
