Herbaspirillum rubrisubalbicans: Hrubri_4526
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Entry
Hrubri_4526 CDS
T04238
Name
(GenBank) transcription regulator protein containing PAS, AAA-type ATPase, HTH
Organism
hrb
Herbaspirillum rubrisubalbicans
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
AAA
AAA_2
HTH_28
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ALU91671
UniProt:
A0A0U3B183
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Position
5321474..5323297
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AA seq
607 aa
AA seq
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MPPSPRISLAEMARSQGAPLTQLSSAGTDRWSVDAHPTLADLSECLFFSPGDGRIWLNDQ
RMLLIHSRSMGTLRRELIDNLGIDKARGLLTRAGYISGARDAQLVRERWPEADPSTILMA
GTRLHTLEGVVKVVPVSFSYDPDSGRYEGEFLWHNSSEADEHLAAYGIAAAPSCWQQIGY
AIGYVSTLLGHLVIFREVECRAMGTPHCRVIGKSAELWSDAEDDLRYLNAQDFVGSGMLA
SDGEIAGDSATPAEQAEAGEAELTRALVGTSSAFNAACHLLNRVAATDATVLFTGESGVG
KERFARMLHQIGKRERQPFIAINCAAIPETLIETELFGVERGAYTGATQSRAGRFELADG
GTLFLDEVGTLSLVAQGKLLRVLQEGEFERVGSTRPVKVNVRVVAATNEDLAQAVRQGRF
RQDLFFRLNVFPIHLPPLRERRDDIPLLMNHFLKFYGQRHGVAVRGFTQRAIQALLNYSF
PGNIRELQNLVERGVILAQGHPLDLPHMFISGETLNDEVLSLALQGETGTLAGRQEDKPD
AGGQQSLLDLLTQWRSTQQDAALSLPDMESTLIAEAIARAEGNLSAAARLLGISRAQLAY
RQQKGPR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtcgccgcgtatttcccttgccgagatggcgcgcagccagggtgccccgctg
acccagctcagttcggccggtaccgaccgctggagcgtggatgcccatcccaccctggcc
gacctgagcgaatgcctgttcttctcgcccggcgatggccgcatctggctcaacgaccag
cgcatgttgttgatccatagccgcagcatgggcacgctgcggcgcgagctgatcgacaac
ctcggcatcgacaaggcacgcggcctgctcacccgcgccggctacatctccggggcacgc
gacgcgcaactggtgcgggagcgttggcccgaggccgatccctccaccatcctcatggcc
ggcacccggctgcatacgctggaaggggtggtcaaggtggtgccggtgagcttcagctat
gaccccgacagcggtcgctatgaaggggaattcctgtggcacaactccagcgaggccgat
gaacacctggccgcctatggcatcgccgccgcaccctcgtgctggcagcagatcggctat
gcgatcggctacgtcagtaccctgctggggcatctggtgatctttcgcgaagtggagtgt
cgcgccatgggcacgccgcattgccgcgtcatcggcaagtcggccgaactgtggagcgat
gccgaggatgacctgcgctacctgaacgcccaggatttcgtcggctcgggaatgctggca
agcgacggcgagatcgctggcgacagcgccaccccggccgaacaggcagaggctggagag
gccgaactgacacgcgcactggtgggcacttcctcggccttcaacgccgcctgccatctg
ctgaaccgggtcgccgcgacggacgccacggtcctcttcacgggggaatcaggggtcggc
aaggaacgctttgcgcgcatgttgcaccagatcggcaagcgcgagcgacagcctttcatc
gccatcaattgcgccgccattcccgagacgctgatcgagaccgaactgttcggcgtggag
cgcggggcctataccggggccacccaatcgcgcgccgggcggttcgaactggccgatggc
ggcacgctctttctcgatgaggtgggcacgctcagtctggtggcgcagggcaagctgctg
cgcgtgctgcaggagggggaattcgagcgggtcggctcgacccggccggtgaaggtcaac
gtgcgggtggtcgcagccaccaacgaagacctggcgcaagcggtgcgtcaggggcgcttc
cggcaggacttgttcttccggctcaatgtattccccatccatctgccgccgctgcgtgaa
cggcgcgacgacattccgctgttgatgaaccacttcctcaagttctatggccagcgccac
ggcgtggcggtgcgcggctttacccagcgcgccatccaggccctgctcaactacagcttc
ccgggcaatatccgcgaattgcagaacctggtcgaacgcggcgtgatcctggcccagggc
catccgctggatttgccgcacatgttcatcagcggcgagacgctcaacgatgaggtgctg
tcactggccttgcagggcgagaccggcacgctggccggacggcaggaagacaagcccgac
gccggtggccagcagagtctgctggacctgctcacgcaatggcggagcacgcagcaagac
gcggcattgtcgttaccggacatggaaagcaccttgatcgccgaagccattgcccgcgcc
gagggcaacctgtcggctgcggcgcgcctgctgggcatcagccgggcgcaactggcgtat
cggcagcagaaaggaccgcgctga
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