Herbaspirillum rubrisubalbicans: Hrubri_4618
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Entry
Hrubri_4618 CDS
T04238
Name
(GenBank) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrb03009
]
Hrubri_4618
Enzymes [BR:
hrb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Hrubri_4618
Ribosome biogenesis [BR:
hrb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Hrubri_4618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ALU91763
LinkDB
All DBs
Position
complement(5433108..5434031)
Genome browser
AA seq
307 aa
AA seq
DB search
MNQNSSVAAAILQDAAQQTYPVSALYVLATPIGNVCDISLRGLHVLALADAVACEDTRNT
SQLLQRYGLSKQLLATHEHNEREAAAKIIERLQAGQRVALVSDAGTPAVSDPGARVVDAV
RAAGFQVIPLPGASAAVTALSASGLADARFLFVGFLPAKTRQRETALQELVDQQAALVFY
EAPHRIVETVQSMLQVFGPTRQVVLARELTKLFEHIHRCPLGEAPAWLEQDANRQRGEFV
VLLEGAQPVEGEDAEGERVLRILLEELPVKQAAALAAQITGQKKNALYERALQIRQGAQE
DDQASSQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaattccagcgtcgccgccgccatcctgcaggatgccgcccagcaaacctat
ccggtgtcggcattatatgtgctggccacgcccatcgggaatgtctgcgacatcagcctg
cgcggcctgcacgtgctggccctggccgatgccgtggcctgcgaggatacccgcaatacc
agccagttgctgcagcgctatggcctgtccaaacagttgctggccacccatgaacacaat
gagcgcgaagccgccgccaagatcatcgagcgtctgcaggccggccagcgcgtggccttg
gtctccgacgccggtacgcccgccgtctccgatccgggcgcccgtgtcgtggacgccgtg
cgcgcagcagggttccaggtcattccgctgccgggggcatcggcggcggtgacggccttg
tcggcctcgggcctggccgatgcacgcttcctcttcgtcggcttcctgccggccaagacg
cgccagcgcgagaccgctctgcaagagctggtcgatcagcaagccgcgctggtgttctat
gaagctccgcaccgcatcgtcgagacggtgcaatcgatgctgcaggtgttcggccccacg
cgccaggtggtgctggcgcgcgaactgaccaagctgttcgagcacatccaccgctgcccg
ctgggcgaagcgccagcctggctggaacaggatgccaaccgccagcgcggcgaattcgtg
gtcttgctggagggggcgcagccggtcgagggtgaagatgccgagggtgagcgcgtgctg
cgcatcttgctggaagagttgccggtcaagcaagctgcggccctggccgcgcagatcacc
ggccagaagaagaatgccttgtatgaacgcgccctgcagatcaggcagggcgcgcaagag
gatgatcaggcgtcaagccaatga
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