Herbaspirillum rubrisubalbicans: Hrubri_4645
Help
Entry
Hrubri_4645 CDS
T04238
Symbol
fhaB
Name
(GenBank) filamentous hemagglutinin outer membrane protein
KO
K15125
filamentous hemagglutinin
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrb00536
]
Hrubri_4645 (fhaB)
Glycosaminoglycan binding proteins [BR:
hrb00536
]
Heparan sulfate / Heparin
Microbial pathogens
Hrubri_4645 (fhaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Ntox21
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
ALU91790
LinkDB
All DBs
Position
complement(5468780..5477740)
Genome browser
AA seq
2986 aa
AA seq
DB search
MLVAVAERASVISGKAVSGTRSAARMMVSGAGRCSALRLSIALALAWHSVVHAQILIDRN
APPTQQASVLSSGNGVPVVNIQQPNARGLSVNRYRRFDVDARGVILNNAGSASKTGLAGY
VAGNPRLAGGGARVIVNQINATDPSYLRGFIEVAGHQAQVIIANPAGITCAGCGFINAPR
VTLTTGTPIIHQGSLESYRVGGGVLSIEGDGMQAGSADYADLIARAVRINAGLWANRVKV
STGLNAVSADHEQVVPGVAPLDATPLRAIDVAHLGGMYAGHIYLMATEQGVGAHNGGKLV
ADTELIVTAAGRLENTGTLAARGHTRLEVAGALGNSGSIGGTTGLTVNAAALDNSGDLLT
PAALEIGLKQGLINGGRIGSNALLTVQAATLENRQDLYSSRSSVQLKIGERLVNRGNIEA
RQTVTANATALDNQGRFISEDALAVITRTHIRNTGTLGSQGAVDLRAASVDNQGLISAGK
AMTISLSGQLNNDKTLQASGDITIDAAAVDNKGSVVTPGSLAMQIQGNVLNTGKIGAAGA
IDFRAAALENRNALYSIRSTIDVQTSGSTLNSGTMEAAQALRLNASALHNSGKLTAVAAM
TLALKQQLNNTGEIGANDALGLTASTLDNRGTLRSANAALTLATEGQSTNYGQILAAKNI
TWTAAGIDNSAGTIVGQDVLLEMRGQRFNNQRGVVVAQQDLRIASGELTNAEGRIAAKGK
LNIASGEIDNDQGLLQARKTVEIDTHGQALRNTHSSKDQGLRAGGGLRIESGPFINRSGV
VVVVGEANLKVSRLDNQGGDMVTAGALNLDADSLDNSTGKLQAQSTMRIDIAGGTLDNHQ
GLIRADSDLVIQARTLRNDDTQDKEQGIEGRDVTIRATDVNNNQGAIRTDRLLKIDSVGS
VENRRGLLSSKGKVGVSDSTPNRSLIIDNDDGRIVAAEELDLRAAALIGKGLLLSHQDLR
IDVVRDLEQRGQTAASANIDIRTAGRFSHYGTTAAGASLSISAKGVENHAGAALLGKEVL
LTATEASTLLNRGLIDGVTTRLQAGTLDNLGPGRLYGDRLAIRADVLHNAPEIVEGVLRA
PVIAARERLDIGAGEIHNSEQALLYSVGDIAIGGTLGQDYRAGGRARAVNNTSATINADG
RLRIAADTINNHNAHFETSEENKPGRRIINYRLVGSSDFISADKARLISIGNSQIIAPEN
WRAMGDEDNFRLLLPSAEYPFDRYGPPVDYNREVLRRDYSSGGIGVVPAYLKPLPESSTE
TAILPALPELFVYLPSDRIWDVFGIARPTAEVPREPDKPAGCSDADNCVSGDYQQRRAAW
KAVRDAQLPAYEKLNEAIRDFNISLRERLFDQWIIHDGTEQIRRTIVTRSAPGMITSGGG
MDLVAGVVNNYASQFIAGGALVADRINGTTINNIGPLGRQTVTSTGTAQRTFVKSHSFKA
DDRRYESAPYASQTIETQFQLEVTPTHGTGSTRDAISRAAITAPTQPLPATGRTNDLRAP
AVDVSLPINALYQVNNSSPTAPLVQTDARFIGNRNWLSSDFLIQRIREQSGPAPQVQRFA
DGFYEQQLIQRQIQEATGQRYLKGFNSNEAQYLALMQAGLQQAQAQRYALGIALSEAQIA
QLKTDIVWLVKQTVTLADGRTQEVLVPQVYLHPSNIQVSGQQTLIAGNDLALQTAQDILN
RGGTIAARSGVSLRADNLRNLGGRIVGGNVDIAAASDIDNAGGSIDADQQLILRAGRDIA
LTSTSVDTANATTVGRNINQVASVSGKDVVIAAGRDFTANAAVIAARGDVSILAARDVNF
GAVTEYFRQEIRWANDRGGSNWVRTLTGPNLVDRGNGAYGTTEVGVNRAVVTGSQEVATQ
VSGSNIRIQAGQDVITQGTQIVADGALQAQAGRDIQIGTANASGSARDQVQRSSGGILSA
KTVRTDDASSFSRQMGSTLSGNAVLVRAGQDVKVTGSDVVSTQGTAVVAGRDVNIASAID
SSTRRSFRQERASGVMGAGLGVTVGSRVQSRDVDGHAQTAAASTVGSVEGNVTIVAGNRY
TQVGSDVLAPKGDIDIAARSVEIRAAEQASRTETEDKFKQSGLTVAVTSPVLSAIQTVGQ
MAEAASKTKDRRMQALAGATAGLSVSNAIDAVIAGQGQTIDGKANQIVTGPADPVTGKAP
TRDANAAEKVGGINLAFSLGASSSQSRSEQTSNTVRGSTVSAGGSVNISAQGGGADSNIV
IQGSDIKAGVNATLKAANEVRLISAQETSEQHSRNSGASGSVGVSIGTDGLLFTASASGS
RGKGEGAEVTQVNTHVDAGNKPTIVSGTDTTISGAVVRGKQVEMEVGTSGKGNLNIASQQ
DSSTFQSRQQSLGGSVSVGTGKMGGSVNYSQSNINSNYASVMEQSGIKAGDGGFQINVRG
NTDLKGAVIASSDKAVAANKNSLTTQTLTQSDIQNIAQYDAQSVGIGVGYNTGKDGGLSA
TPPMVVGANGSASSTTRSAISGGVITITDDKKQQELTGKTAEQAIASVNREVSSSKEGSN
ALKPIFNKEEIENKTAIAGAFTRELGSFLNNRAKEADEARRKLDDAIAEERGNPVEQRDE
TRLRRLTEQYLDAEKWSSAGTYRQYATAIVGAVTGNLNASTSQFIQAAAVNYLQGLGAEQ
VKRIADSLESEPARVALQGVLGCAGALAKDAACGAGVLGASAGTVINALLQAAESPGHQE
KESRKNLVTSIVAGIATAAGNKDSPTATLAAQLEAENNALGMSYSKQFLNKIRACDASQG
TCFAELKEEAAKQRKLFTEQLEKGCNGAAATSYACETVMSSGQAALNDLAHALYFAKSGD
QKAYVKVLIAEQTLDMDRQYPNLVALGERASFLDQLALQLQQMWVDVGPAGASAGLIGSG
QSAIVNINKVRSNEVKSDPHNSERKRPEPYFKDTQEAAAAAHELGFVKINETVNKQAVFR
KGKLYITRDADGHNGGAWKMATSVKNLQSKQTRLGTYDSKLNKIGD
NT seq
8961 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggccgtggcagaaagggcgtccgtcatcagtggcaaggcagtgagcggcacg
cgcagtgccgctcggatgatggtgtcaggtgcggggcgatgttcggcattgaggttgagt
attgccctcgcactggcctggcacagcgtggtccatgcgcagatcctgatcgaccgcaac
gccccgccgacgcaacaggctagcgtcctcagcagtggcaatggcgtgccggtggtcaac
atccagcaacccaatgcccgcggtctgtcggtgaaccgctatcgccgcttcgacgtcgat
gctcggggcgtgatccttaacaatgccggcagtgccagcaagaccggactggccggatat
gtcgccggcaatccgcgcctggccggcggtggcgcccgggtcatcgtcaaccagatcaac
gcaaccgatcccagctatctgcgcggcttcatcgaagtggcgggccatcaggcccaggtc
atcatcgccaatccggccggcatcacctgtgccggctgcggcttcatcaatgcaccgcgc
gtgaccttgacgaccggtacacccatcatccaccagggcagcctggagagttatcgcgtc
ggcggcggcgtgctctccatcgaaggtgacgggatgcaggccggcagcgccgactacgcc
gacctgattgcgcgtgcggtgcgcatcaatgcgggtttgtgggccaaccgagtcaaggtc
agcaccggtttgaatgcggtcagtgccgatcatgaacaagtggtacctggcgtagcgccg
ctggatgccacaccgttacgcgccatcgacgtcgcgcatctgggcggcatgtatgccggc
cacatctacctgatggctaccgaacagggagtgggggcgcacaacggcggcaagctggtc
gctgacaccgaattgatcgtcacggctgccggtcgcctggagaacaccggcaccctggct
gcacgcggccacacccgtctggaggtcgccggcgcgctcggcaacagcggcagcatcggt
ggcaccaccggccttaccgtgaacgccgccgcgctggacaatagcggcgatttgctcacc
cccgctgcccttgagattgggctcaagcaggggctcatcaatggcggaagaatcggcagc
aatgcattgctcacggtgcaggccgccacgctggagaatcgtcaggatctctattcaagc
cgctccagcgtgcaattgaagatcggtgagcggctcgtcaatcgcggcaacatcgaagcc
cggcagaccgtgacggccaatgcgactgcactggataaccagggccgattcatcagcgag
gatgcgctcgccgtcatcacccgcacccacatccgaaataccggcaccctgggtagccaa
ggcgcagtcgacctgcgtgctgccagcgtggacaaccagggcctgatcagtgccggcaag
gccatgacgatcagtctgtccgggcaactcaataacgacaagacactccaggcgagcggc
gacatcactatcgatgcggcggcggtcgacaacaagggcagcgtcgtcacacccggcagc
ttggcgatgcagatccagggcaatgtgctcaacaccggcaagatcggtgcggctggcgcc
atcgactttcgcgctgctgcgctggagaatcgcaatgcgctgtattcgatccgttccacc
atcgatgtgcaaaccagcggcagcaccctcaacagcggcacgatggaagccgcgcaagcg
ctgcgcctgaacgcatcggcattgcacaacagcggcaagctgaccgctgttgcggccatg
acactggcgctcaagcagcaactcaataacaccggagaaataggcgccaacgatgccctc
ggcctcaccgccagcacgctggacaatcgcggcacgctgcgctctgcaaacgccgcgctc
acgcttgccaccgaaggccaaagcaccaactacggccagatcttggcggcaaaaaacatc
acatggaccgccgccggcatcgacaacagcgccggcacgatcgttggccaagacgtgctg
ctggagatgcgcgggcagcgcttcaacaaccagcgcggcgtggtggtggcgcagcaggat
ctgcgcattgccagcggcgaactcactaatgccgagggccgtatcgccgccaagggcaag
ctgaatattgccagcggcgagatcgacaacgaccaaggcttgctgcaagccagaaagacg
gtcgagatcgatacccatggccaggcgctgcgcaacacccattccagcaaggaccagggc
ctgcgcgccggtggcggcttgcggatcgagagtgggccgttcatcaatcgcagtggcgtg
gtggtcgtggtgggtgaggccaacctgaaggtcagccgcctggacaaccagggtggtgat
atggtcacggcaggtgcgctcaacctcgacgccgacagcctggataacagcacaggcaaa
ctgcaagcgcagagtacgatgcgcatcgatatcgccggcggtacgctggacaaccaccaa
ggcctgatccgcgccgacagcgacctcgtcatccaggcccgcaccctgcgcaacgacgac
acccaggacaaggagcaaggcatcgaaggacgcgatgtcaccatccgcgccactgacgtc
aacaacaaccagggcgccatccgcaccgaccgcttgctcaagatcgactccgtgggcagc
gtagagaaccgtcgcggcctgctctcgtccaagggcaaggtaggggtgagcgacagcacc
cccaatcgcagcctgatcatcgacaacgacgatggccgcatcgtcgccgctgaagaactc
gacctgcgcgccgcggccctgatcggaaaaggtctgctattgagccaccaggatctgcgc
atcgatgtcgtgcgcgatctggagcagcgcggccagaccgccgccagcgccaacatcgac
attcgcaccgccggcagattcagccactacggcaccaccgctgccggtgcgtccctgagc
atcagcgccaagggcgtcgagaaccatgccggcgccgccctgctcggcaaggaggtactg
ctcacggcaaccgaagccagcaccttgctcaaccgtggcttgatcgacggcgtcaccacg
cgcctgcaagccggcacgctcgacaacctcggccccggccgcctctatggcgaccgcctc
gccatccgcgccgacgtgctgcataacgctccagaaatcgtcgagggcgtcctgcgcgcc
cccgtcatcgctgcacgcgaacggctggacatcggcgccggcgagattcacaacagcgaa
caggcgctgctgtactcggtgggcgatatcgccatcggcggcacgctgggccaggactac
cgagccgggggccgcgcccgcgccgtcaacaacaccagcgccaccatcaatgccgatggt
cgcttgcgcatcgctgccgatacgatcaacaaccataatgcgcatttcgagacatccgaa
gagaacaagccgggacgcaggatcatcaactaccgcctggtcggttcatcggatttcatc
tcggcagacaaggcaagactcatcagtataggtaacagccagattatcgcgcccgagaac
tggcgcgcgatgggcgatgaggacaacttccgcctattgcttccttcggcagaatatcct
ttcgaccgttatggcccgcctgttgattacaaccgggaagtcctcaggcgagattactcc
tccggtggtatcggtgtcgttcctgcgtatctcaagccacttcctgagtccagtacggaa
accgcgatcctgccggcattgcctgagctgtttgtctatctgccaagcgaccggatatgg
gatgtcttcggcatagcgcgccccacggctgaagtgccgcgcgagccggacaagccggct
ggctgcagcgacgctgacaactgtgtcagtggcgactaccagcaacgacgcgccgcctgg
aaggcagtgcgcgatgcccagcttcccgcctacgaaaagctcaacgaggccatcagggat
ttcaacatcagtctgcgtgagcgcctgttcgatcaatggatcatccacgatggcaccgaa
cagattcgtcgcaccatcgtcacgcgcagcgcaccgggcatgatcacctcgggcggcggc
atggacctggtggcgggcgtggtcaacaactatgccagccaattcattgcaggcggcgcg
ctggtcgcggaccgtattaacggcaccaccatcaacaacatcggtcccctgggccggcag
accgtcacctcgacaggaacggcccagcgcactttcgtcaagagccacagcttcaaggca
gacgaccgccgatatgaaagcgcgccctacgcttcccaaacgatagaaacccagttccag
ctggaggtcacccccacgcacggcaccggttccacgcgggacgccatttcccgggccgcc
atcacggcccccacgcagcccttgccggccaccggcagaactaacgatctgcgcgcccct
gcggtcgatgtgagcctgccgatcaatgcgctctaccaggtcaacaacagtagcccgacc
gcgcccctggtacagaccgatgcgcgcttcatcggcaaccgcaactggctgtcctcggac
ttcctgatccagcgcatccgggaacagtccggccccgccccgcaggtccagcgtttcgcc
gatggtttctatgaacagcaactgatccagcgccagatccaggaagccaccggccagcgt
tatctgaagggcttcaacagcaacgaagcgcaatacctggccctgatgcaagccggcctg
caacaagcgcaggcccagcgctacgcattgggcatcgcgctctccgaggcgcagatcgcc
cagctcaagacggacatcgtctggctggtcaagcagacggtaacgctggccgatggccgc
acccaggaagtgctggtgccgcaggtgtacctgcacccttccaacatccaggtgagcggc
cagcagaccctgatcgccggcaacgatctggccttgcagacggcgcaggacatcctcaac
cgtggcggcacgattgccgcgcgcagtggcgtttccctgcgtgccgacaacctccgcaac
ctgggtggacgcatcgtgggcggcaatgtcgatatcgccgccgccagcgatatcgacaat
gccggaggcagcatcgatgccgaccagcagctcatcctgcgcgcagggcgagacatcgcc
ctcaccagcaccagcgtggacacggccaacgccaccaccgtcgggcgcaacatcaatcag
gtcgccagcgtcagcggcaaggacgtagtgatagcggcaggccgcgacttcacggccaat
gccgccgtgatcgcagccaggggagacgtgagcattctggcggcacgcgacgtcaacttt
ggggccgtgacggaatacttccgccaggagatccgttgggccaatgaccggggcggcagc
aactgggttcgcacattgactggcccgaatctggtggaccgtggcaatggtgcgtatggc
accaccgaggtgggcgtgaaccgcgccgtggtcactggcagccaggaagtcgcgacccag
gtcagcggcagcaacatccgcatccaggcgggccaggatgtcatcacccagggaacgcag
atcgtggccgatggcgccctgcaagcgcaagccggacgcgacatccagatcggcaccgcc
aatgcatcaggcagcgcgcgcgaccaggtgcagcgcagcagcggcggcatcctcagtgcc
aagacggtacgcacggatgacgccagcagcttcagccgccagatgggcagcaccttgtct
ggcaacgccgtcttggtccgtgcgggccaggatgtgaaggtgacgggaagcgatgtcgtc
tccacgcagggtacagcggtggtggcgggacgggatgtgaacattgcttccgcgatcgac
agcagtacccggcgcagcttccggcaggagcgcgccagtggggtgatgggggcgggcttg
ggcgtgacggtgggtagtcgcgtgcagagtcgtgatgtggacggacacgcgcagaccgct
gctgcctcgacggtgggcagtgtggaaggcaacgtcactattgtggcgggtaatcgatat
acgcaggtggggagtgatgtgctggcgcccaagggcgatatcgatattgcggccaggtcg
gtggagattcgggcggcggagcaggcgagccgcacggagactgaagacaagttcaaacaa
agtggcttgacggtggcggtgaccagcccagtattgtcggccatccagacggtaggccag
atggccgaggccgcaagcaagaccaaggatcgacggatgcaggcattggctggtgcgacc
gccgggctatcggtttccaatgcgatagatgccgtcatcgccggacaaggccagacgatt
gatggcaaggccaaccagatcgtcacggggccagcggaccctgtcacagggaaggctcct
acgcgagatgccaatgccgcagagaaggtcggcggcatcaacctggccttcagcctgggt
gcaagcagcagccagagccgatccgaacagaccagcaatacggtgcgcggttcgaccgtg
tcggcgggcgggagcgtcaatatcagcgcccaaggcggtggcgccgacagcaacatcgtg
atccagggaagcgacatcaaggcgggcgtcaatgccacgctgaaggcggccaatgaggtc
cgactgatttcggcccaagaaacatccgagcagcacagccgcaacagcggtgcttcggga
tcggtaggtgtctccattggcaccgacggtttgttgttcacagccagcgcctcggggagc
cggggcaagggtgaaggcgctgaagttacgcaggtcaatacgcatgttgacgcgggcaac
aagcccaccatcgtctctggaaccgatacgaccatcagcggcgcagtggtgcgggggaag
caggtggagatggaggtgggcaccagcggcaaaggcaatctgaacatcgccagccagcag
gacagcagtaccttccagagtcggcagcaaagcttgggtgggagcgtttcggtgggcacg
ggaaagatgggcggcagcgtcaactacagccagtcgaacatcaacagcaactatgccagc
gtgatggaacagtccggcatcaaggcgggtgatggtgggttccaaatcaatgtgcgtggc
aacacggatctgaagggcgcggtgatcgccagtagcgacaaggccgtggcggccaacaag
aacagcttgaccacgcagacgctgacgcaaagcgatatccagaacattgcgcagtatgac
gcgcagagcgtgggcattggcgtgggttacaacacaggcaaggatggcggcctatcggcg
accccgccgatggttgttggagccaacggtagtgcgtcaagcacaaccaggagcgccatc
agtggcggagtcatcacgatcaccgatgacaagaaacagcaggagttgacgggcaagacg
gcggagcaggctatcgcctcggtgaatcgggaggtgagtagcagcaaggaggggagcaat
gcgctcaagccgatttttaataaggaggagattgagaacaagacggccattgcgggagcc
ttcacgcgcgagcttggtagcttcctgaataaccgggcgaaggaagcggatgaggccagg
cgcaagctggatgatgccatcgcagaggagaggggcaatccggttgaacaacgcgacgag
acaaggctgcgtcgtttgacggagcaatatctggatgcagaaaaatggtcttcggctggt
acgtatcgtcaatatgcgacggcgattgtaggagcggtgacaggaaatctgaatgcctcc
acttcgcagttcatacaggcggcggcagtcaattatctacagggtctgggcgcagagcag
gtcaagagaatcgctgacagcttggagagtgagcctgcacgggtggcattgcagggcgtt
ctgggatgcgccggagccttggccaaagatgctgcttgtggtgccggagtgcttggcgca
tctgccgggacggtcatcaatgcactactgcaagctgcggagagtccaggccatcaggag
aaggagtctcgcaagaacttggtgaccagcatcgtggcggggattgcgaccgctgccgga
aacaaggatagcccaacggccacgcttgccgctcaattggaggccgaaaacaatgctttg
ggaatgagttactccaaacaattcctgaacaagatcagagcttgcgacgcatcgcagggg
acatgctttgccgaactgaaggaagaagccgccaagcaaagaaagttgttcaccgagcag
ttggagaaaggatgcaatggggcggcggcgacttcctatgcatgtgagacggtaatgagc
tctggacaggccgcgctcaacgatcttgctcatgcgctgtacttcgcgaagtccggtgat
caaaaagcctacgtcaaggtgctgattgccgaacagacgttagatatggatcggcagtat
cccaatctggtggcgttgggggagcgggcgagtttcttggatcagcttgctttgcaattg
cagcagatgtgggtggatgttgggcctgcgggggcaagcgccgggctgattggttctggc
cagtcagctattgttaatattaacaaggttcgaagcaatgaagtaaagagcgatccacat
aactcagaaaggaagcggccggagccatactttaaagatacccaggaagctgcggcggcg
gctcacgaattgggattcgtgaaaataaatgagacagtaaataaacaagccgtttttaga
aaaggaaaactctacattacgagagacgcggacgggcacaatggcggtgcgtggaagatg
gcaacgtcagttaaaaatcttcaaagtaagcagacacgcttaggtacttacgatagcaag
ttaaataagatcggtgactaa
DBGET
integrated database retrieval system
