Halobaculum roseum: K6T36_00690
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Entry
K6T36_00690 CDS
T07547
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hre
Halobaculum roseum
Pathway
hre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T36_00690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hre03021
]
K6T36_00690
Transcription machinery [BR:
hre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K6T36_00690
Prokaryotic type
Archaeal type
TFB
K6T36_00690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Anti-TRAP
Sigma70_r4
A2L_zn_ribbon
HTH_Tnp_ISL3
Zn_ribbon_LysW
Zn_ribbon_RRN7
DUF7129
Zn_ribbon_PaaD
Cyclin_N
Zn_ribbon_RPB9
Zn_ribbon_Top1
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
QZY02752
LinkDB
All DBs
Position
139613..140602
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AA seq
329 aa
AA seq
DB search
MSENVRSYTDDRSSTATVDEDESASESEGEQLECPECGGDLVNDTERGETVCRDCGLVVE
EDEIDHGPEWRAFDSKEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNQLSGRQREK
MQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDEDLLPG
RSIEGVATASLYAAARQAGTPRSLDEITNVSRVEKDEIARTYRYVVRELKLEIQPADPES
YVPRFASDLDLSDESERRARQLLQTAKQEGVHSGKSPVGLAAAAVYAASLLTNEKVTQSE
VSEVANISEVTIRNRYHELLEAEEQVQLG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaacgtccgaagttacacggacgaccgatcgagtacggccaccgtcgacgag
gacgagtcggcgtccgagtcggagggagaacagctcgagtgtcccgaatgcggcggcgac
ctcgtgaacgacaccgagcgcggcgagacggtgtgtcgcgactgcggtctcgtcgtcgag
gaggacgagatcgaccacgggccggagtggcgcgcgttcgactccaaggagaaggacgag
aagtcccgcgtcggcgccccgacgacgaacatgatgcacgacaaggggctgtcgaccaac
atcggctggcaggacaaggacgcctacggcaaccagctgtcgggccgccagcgcgagaag
atgcagcgcctgcgcacctggaacgagcgcttccgcacgcgcgactccaaggaacggaac
ctcaagcaggcgctcggggagatcgaccgtatggcgagcgcgctcggcctcccggacaac
gtccgcgagaccgcctcggtcatctaccgccgcgcgctcgacgaggatctcctccctggc
cgttccatcgagggcgtcgccaccgcgagcctctatgcggctgctcgacaggccgggacg
ccccgcagcctcgacgagatcacgaacgtctcgcgggtcgagaaggacgagatcgcccgg
acgtatcgctacgtcgtccgcgaactgaagctggagatccagccggccgaccccgagagc
tacgtcccgcggttcgcatccgacctggacctgtccgacgagtccgaacgtcgcgcccgc
cagctcctccagacggccaaacaggagggcgtccactcgggcaagtcgccggtgggactc
gccgccgcggccgtctacgccgcctcgctgctcaccaacgagaaggtgacccaaagcgag
gtgagcgaggtggcgaacatctcggaggtcaccatccggaaccggtaccacgagctgctg
gaagccgaggaacaggtccagctcggctga
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