Halobaculum roseum: K6T36_01325
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Entry
K6T36_01325 CDS
T07547
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hre
Halobaculum roseum
Pathway
hre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K6T36_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hre03019
]
K6T36_01325
03009 Ribosome biogenesis [BR:
hre03009
]
K6T36_01325
04131 Membrane trafficking [BR:
hre04131
]
K6T36_01325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hre04147
]
K6T36_01325
Messenger RNA biogenesis [BR:
hre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K6T36_01325
Ribosome biogenesis [BR:
hre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K6T36_01325
Membrane trafficking [BR:
hre04131
]
SNARE
SNARE associated proteins
Others
K6T36_01325
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K6T36_01325
Exosome [BR:
hre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K6T36_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_33
AAA_14
AAA_22
NPHP3_N
nSTAND3
AAA_28
RNA_helicase
AAA_7
Mg_chelatase
AAA_lid_PRS2_C
IstB_IS21
DUF815
AAA_3
NB-ARC
Sigma54_activat
SLFN-g3_helicase
Parvo_NS1
ABC_tran
Zeta_toxin
AAA_11
AAA_17
AAA_18
Vps4_C
AAA_30
PhoH
AAA_19
TsaE
AAA_24
ATPase_2
bpMoxR
Bac_DnaA
Zot
DUF3860-like
SOAR
Motif
Other DBs
NCBI-ProteinID:
QZY02869
LinkDB
All DBs
Position
complement(248679..250940)
Genome browser
AA seq
753 aa
AA seq
DB search
MKLTVKPLKQKDAGRRLAAIDRVAADELGLSGGDYIRIEGDSTGIARVWPGYPEDDNTGI
VRIDGQLRQEAGVGIDDRVTVEPAEVEPAERITIALPQQFGVRGNIGSMIRDKLSGQPVT
QGQTIRFPLGLGLMGGGSQAVPLKIASTNPSGTVVITDSTDVDISEKPAEQIAEGAAGGG
AETPDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIA
KAVANEIDADFQTLSGPEIMSKYYGESEEQLREVFEEAAENAPAIIFMDELDSIAPKREE
AGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVPDRD
GRREILQVHTRNMPLSDDVDIEEYAETTHGFVGADLESLAKEAGMNALRRIRPQLDLEED
EIDAEVLESIQVTGADMKEALKGIEPSALREVFVEVPDVTWNDVGGLEDTKERLRETIQW
PLDYPEVFEAMDMESAKGVLMYGPPGTGKTLLAKAVANESESNFISVKGPELLNKFVGES
EKGVREIFSKARENAPTVIFFDEIDAIATERGRNTGDSGVSERVVSQLLTELDGLETLED
VVVIATTNRPDLIDNALLRPGRLDRHVHVPVPDEEGRRKIFGVHTEHKPLADDVDLDTLA
RKTDGYVGADIEAVCREASMNASREFINSVSPEEVDDSVGNVRVTMEHFEQALEEVHPSV
TEETKERYEEIEQRFRNREARDKQEAEMGRTFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacggtcaaacccctgaaacagaaggacgcggggcgtcgcctcgccgcgatc
gaccgggtcgccgccgacgagctcggcctctcgggcggcgattacatccgcatcgaggga
gactcgaccggtatcgcccgcgtgtggccggggtacccggaggacgacaacacgggtatc
gtccggatcgacggccagctccggcaggaggcgggcgtcgggatcgacgaccgcgtgacc
gtcgagccggccgaggtcgagcccgctgagcggatcacgatcgcgctgccccagcagttc
ggtgtccgcggcaatatcggctcgatgatccgcgacaagctctccggacagccggtcacc
caggggcagacgatccggttcccgctcgggctggggctgatgggcggcggctcgcaggcg
gttccgctcaagatcgcctcgacgaacccctccggaaccgtcgtcatcaccgactccacg
gacgtggatatctccgagaagccggccgagcagatcgcagagggcgcggccggcggcggc
gccgagacaccggacgtgacctacgaggacatcggcgggctcgacgacgagctcgaacag
gtccgcgagatgatcgagctgccgatgcgccacccggagctgttcaagcgcctcggcatc
gagcccccgaagggcgtgctcctccacggcccgccgggcaccgggaagacgctcatcgcg
aaggccgtcgccaacgagatcgacgccgacttccagacgctctcgggccccgagatcatg
tcgaagtactacggggagtccgaggagcagctccgcgaggtgttcgaggaggccgccgag
aacgctcccgcgatcatcttcatggacgagctggactccatcgcgcccaagcgcgaggag
gccggcggcgacgtggaacgccgcgtcgtggcccagctgctgtcgctgatggacgggctc
gaggagcgcggcgaggtcgtggtcatcggcgccaccaaccgcgtcgacgccatcgacccc
gcgctccggcgcggcggccgcttcgaccgcgagatcgaggtcggtgtcccggaccgcgac
ggacgccgcgagatcctgcaggtccacacgcggaacatgccgttgtcggacgacgtcgac
atcgaggagtacgccgagacgacccacggcttcgtcggcgccgatctcgagagcctggcg
aaggaggccgggatgaacgcgctgcggcggatccgcccgcagctcgatctggaggaggac
gagatagacgccgaggtgttggagtcgatccaggtcaccggcgccgacatgaaggaggcg
ctcaaggggatcgagccctccgcgctgcgggaggtgttcgtcgaggtccccgacgtgacg
tggaacgacgtgggcggcctggaggacacgaaagaacgcctccgcgagacgatccagtgg
cccctcgattacccggaggtgttcgaggccatggacatggagtccgcgaagggcgtgctc
atgtacggcccgccgggcaccgggaagacgctgctcgcgaaggccgtcgccaacgaatcc
gagtccaacttcatctccgtgaaggggcccgaactgctcaacaagttcgtcggcgagtcc
gagaagggcgtccgcgagatcttcagcaaggcccgcgagaacgcgccgaccgtcatcttc
ttcgacgagatcgacgcgatcgcgaccgagcgcggccgcaacaccggcgactccggcgtc
tccgagcgcgtcgtctcccagctgctgaccgagctcgacggcctcgaaacgctcgaggac
gtggtcgtcatcgcgacgacgaaccggccggacctcatcgacaacgccctgctgcgtccg
ggtcgcctggaccgccacgtccacgtgcccgtccccgacgaggaggggcgccggaagatc
ttcggggtccacaccgaacacaagccgctggccgacgacgtcgacctcgacacgctcgcg
cgcaagaccgacggatacgtcggcgccgacatcgaagccgtctgtcgcgaggcgtcgatg
aacgcctcgcgggagttcatcaactccgtgtcgcccgaggaggtggacgactccgtcggc
aacgtccgcgtcacgatggagcacttcgagcaggcgctggaggaggtccacccctccgtc
accgaggagacgaaggaacgctacgaggagatcgaacagcggttccggaaccgcgaggcc
cgcgacaagcaggaggcggagatgggtcggacgttccaatga
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