Halobaculum roseum: K6T36_02135
Help
Entry
K6T36_02135 CDS
T07547
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hre
Halobaculum roseum
Pathway
hre03022
Basal transcription factors
hre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T36_02135
09124 Replication and repair
03420 Nucleotide excision repair
K6T36_02135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hre03021
]
K6T36_02135
03400 DNA repair and recombination proteins [BR:
hre03400
]
K6T36_02135
Enzymes [BR:
hre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6T36_02135
Transcription machinery [BR:
hre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K6T36_02135
DNA repair and recombination proteins [BR:
hre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K6T36_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
ERCC3_RAD25_C
Helicase_C
SNF2-rel_dom
DEAD
DUF7342
HTH_20
AAA_22
TrmB
MarR_2
HTH_IclR
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QZY03011
LinkDB
All DBs
Position
414568..416505
Genome browser
AA seq
645 aa
AA seq
DB search
MTDDGDEPPAGGGVGEDGDGVNVNDDDGVDANEDVVDDGVADEAPADLTIDGFYDAVEAA
GRPVLTASGVARETDRTQAAARDHLDALAEEGSVERVDVESDPVVYYPSSWGDLAERERV
VMFPTRRQIVVDQPTQYTRAMLADFAHLVDSTGTEPGTRGYLYEIRQEDIWAAPFEEFAE
LLARMRSVLPRRSPHLEEWAENQWKRARQFRLRTHEDGYVVLEADREELMGNVARQKLDE
SVLQAELSDTESWVNDEEIGRVKRVLYDAGYPVIDERDLESGDPLDVTLEADLRAYQTDW
VDRFTEQRAGVFVAPPGSGKTVAALGALEAVGGETLILVPSRELAGQWRSEILAHTDLDD
ADIGEYHGGEKEIAPVTIATYQTAGMDRHRSLFDSREWGLVITDEAHHIPAPVFRRAADL
QSKHRLGLSATPIREDDNEEEIFTLIGPPIGTDWGALFDAGFVQEPEVEIRYVPWRDDEA
ENEWASADGRQRHMAAARNPAKADEVRRLRERHGDARALVFVDYLDQGEALAAELGVPFV
SGETRHHVRQRLFEEFRQGERRTLVVSRIADEGIDLPNAELAVVASGLGGSRRQGAQRAG
RTMRPAGSALVYVLATRGTSEEDFAQRQMNHLAEKGIRVHERTVE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacggcgacgagccgcccgcgggcggcggcgtcggcgaggacggcgacggc
gtcaacgtgaacgacgacgacggcgtcgacgcgaacgaagacgtcgtcgacgacggtgtc
gccgacgaggcccccgccgacctcacgatcgacggcttctacgacgccgtcgaggcggcg
gggcgcccggtgctcacagcttcgggggtcgcacgcgagaccgaccgcacgcaggcggcg
gcgcgcgatcacctcgacgcgctcgccgaggaagggtccgtcgagcgcgtcgacgtggag
tcggacccagtggtgtactacccgagtagctggggcgacctggccgagcgcgagcgggtg
gtcatgttcccgacgcgccggcagatcgtggtggaccagcccacacagtacacccgtgcg
atgctcgcggacttcgcccacctcgtcgactcgaccgggaccgaacccggcacccgcggc
tacctctacgagatccgccaggaggacatctgggcggcaccgttcgaggagttcgccgag
ttgctcgcgcggatgcggtcggtgctgccgcggcgctcgccgcatctggaggagtgggcg
gaaaaccagtggaagcgcgcgcggcagttccgccttcgcacccacgaggacggttacgtc
gtgctggaggccgaccgcgaggaactgatgggcaacgtcgcccgccagaagctcgacgag
tccgtgttacaggcggaactctcggacaccgaatcgtgggtgaacgacgaagagatcggc
cgcgtgaaacgcgtcctctacgatgctggctaccccgtcatcgacgagcgcgatctcgaa
tcgggcgaccccctcgacgtgacgctagaggcggacctccgcgcgtaccagacggactgg
gtcgaccgcttcaccgagcagcgggcgggcgtgttcgtcgcgccgccggggtcgggcaag
accgtcgccgcgctgggcgccctggaggcggtcggcggcgagacgcttatcctcgtcccg
tcccgggaactcgccggacagtggcgttccgagatcctcgctcacaccgacctcgacgac
gccgatatcggcgagtaccacggcggcgaaaaggagatcgcgccggtgacgatcgccacc
tatcagaccgctggaatggaccgccaccgctcgctgttcgactcccgcgagtgggggctc
gtgatcacggacgaagcacaccacattcccgccccggtgttccggcgggccgcggacctc
cagagcaaacatcgcctcggcctgtcggcgacgccgatacgggaggacgacaacgaggag
gagatcttcacgctcatcggcccgcccatcggcaccgactggggcgcgctgttcgacgcc
gggttcgtccaggagccggaagtcgagatccggtacgtcccgtggcgcgacgacgaggcc
gaaaacgagtgggccagcgccgacggccgccagcgccacatggccgccgcacgcaacccg
gcgaaggccgacgaggtgcgtcgcctgcgcgagcgtcacggcgacgcgagggcgctcgtg
ttcgtcgactacctcgaccagggcgaggcgctcgcggccgagttgggcgtcccgttcgtc
tccggggagacgcgccaccacgtccgacaacgactcttcgaggagttccggcagggcgag
cgccggacgctcgtcgtctcgcggatcgccgacgaggggatcgacctcccgaacgcggag
ctggccgtcgtcgcatccgggctcggggggagtcgccggcagggcgcacagcgtgcaggg
cggacgatgcgtcccgcgggatcggcgctcgtgtacgtgctcgcgacccgggggaccagc
gaggaggacttcgcacagcggcagatgaaccacctcgcggagaaggggatccgcgtccac
gagcggaccgtcgagtag
DBGET
integrated database retrieval system
