Halobaculum roseum: K6T36_04495
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Entry
K6T36_04495 CDS
T07547
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hre
Halobaculum roseum
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hre03032
]
K6T36_04495 (gyrB)
03400 DNA repair and recombination proteins [BR:
hre03400
]
K6T36_04495 (gyrB)
Enzymes [BR:
hre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K6T36_04495 (gyrB)
DNA replication proteins [BR:
hre03032
]
Prokaryotic type
DNA Topoisomerases
K6T36_04495 (gyrB)
DNA repair and recombination proteins [BR:
hre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6T36_04495 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QZY03434
LinkDB
All DBs
Position
889845..891779
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AA seq
644 aa
AA seq
DB search
MSDSGDSEYGAGQIQVLEGLQAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCD
EIEVTVHDDGSVSVSDDGRGIPVDSHEKYDRPALEVIMTVLHAGGKFDNKSYQVSGGLHG
VGVSVVNALSKRLEVEVKRDGAVWRHRFDHGEPEEGAFERVRDMESDEDTGTTIRFWPDT
DIFETTDFSFDTLANRLRELAFLNEGVTITLADERDGVTETFHYDGGIREFVEYLNETRT
PLHRDVVYFEADEEAEDGVVQVEVAMQATDELQGSVHAFANNINTREGGTHLTGFKTALT
RVVNDYANDNGLIGDLDGNLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVE
SAVHEHLGTFFEENPDTAETIVSKAAEAARARKAAKQAEELTRRKSALESTALPGKLSDC
QSRDPEDSELFIVEGDSAGGSAKLGRNPEFQAILPLGGKILNVEKHRLDRVLQNDEIRNM
ITAVGTGVGDEFDIEEARYHKIIMMTDADVDGAHIRTLLLTLFYRHMRPLIEAGYVYAAQ
PPLYRIRYRGTTYDAMTEAERETIVEEKCDGNPDQVQRFKGLGEMNPEQLWETTMNPENR
VLKQITIDDAAAADRMFNVLMGDSVEPRKQFIKEHAPEAEWVDI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcaggggatagtgagtacggtgccgggcagattcaggtgctggagggcctc
caggccgtccgcaagcgcccggcgatgtacatcggttctacggactctcgcggcctccat
catctggtctacgaggtcgtcgacaactccatcgacgaggcgctcgcgggctactgcgac
gagatcgaggtgaccgtccacgacgacggctcggtctccgtctccgacgacgggcgcgga
atccccgtcgacagccacgagaagtacgaccgtcccgccctggaggtcatcatgacggtc
ctccacgccggcgggaagttcgacaacaagtcctaccaggtgtcgggcgggctccacggc
gtcggcgtctccgtcgtcaacgcgctctcgaagcggctcgaagtggaggtgaagcgcgac
ggcgccgtctggcgccaccgcttcgaccacggcgagcccgaggagggcgccttcgagcgc
gtccgcgacatggagtccgacgaggacacgggcacgaccatccggttttggcccgacacg
gacatcttcgagacgaccgacttctcgttcgacacgctcgcgaaccgcctgcgcgagctg
gcgttcctgaacgagggcgtcacgatcacgctggccgacgagcgcgacggcgtcaccgag
acgttccactacgacggcggcatccgcgagttcgtcgagtacctcaacgagacgcgcacg
ccgctgcaccgcgacgtggtgtacttcgaggccgacgaggaggccgaggacggcgtcgtg
caggtggaagtcgcgatgcaggcgaccgacgagctccaggggtcagtccacgcgttcgcc
aacaacatcaacacgcgcgagggcgggacccacctcaccgggttcaagaccgcgctgacg
cgcgtcgtcaacgactacgccaacgacaacggcctcatcggcgacctcgacggcaacctc
aagggcgaggacgtccgcgaggggctgacggccgtcatctcggtgaagcaccccgacccg
cagttcgagggacaaacgaagacgaagctcgggaacagcgaggtccgcgggatcgtcgag
tcggcggtccacgagcacctcggcacgttcttcgaggagaaccccgacaccgccgagacg
atcgtgagcaaggccgccgaggccgcgcgcgcccgcaaagcggccaaacaggccgaggag
ctcacccggcggaagtccgcgctggagtcgacggcgctgcccgggaagctctcggactgc
cagtcccgcgatcccgaggactcggagctgttcatcgtggagggcgactccgcgggcggg
tcggcgaagctgggacgtaaccccgagttccaggcgatcctcccgctgggcgggaagatc
ctcaacgtcgagaagcaccgcctcgaccgggtgctccagaacgacgagatccggaacatg
atcaccgccgtcggcaccggggtcggcgacgagttcgacatcgaggaggcgcgctatcac
aagatcatcatgatgaccgacgccgacgtcgacggcgcgcacatccggacgctgttgctc
acgctgttctaccggcacatgcgcccgctgatcgaggcggggtacgtgtacgccgcccaa
ccgccgctgtaccgcatccgctatcggggaacgacctacgacgcgatgaccgaggccgag
cgcgagaccatcgtcgaggagaagtgtgacgggaaccccgaccaggtccagcggttcaag
gggctcggcgagatgaaccccgaacagctgtgggagacgaccatgaaccccgagaaccgg
gtgctcaaacagatcacgatcgacgacgccgcggccgcagaccgcatgttcaacgtcctg
atgggcgattcggtcgagccccgcaagcagttcatcaaggagcacgcgcccgaggcggag
tgggtggacatctga
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