Halobaculum roseum: K6T36_05420
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Entry
K6T36_05420 CDS
T07547
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hre
Halobaculum roseum
Pathway
hre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T36_05420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hre03021
]
K6T36_05420
Transcription machinery [BR:
hre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K6T36_05420
Prokaryotic type
Archaeal type
TFB
K6T36_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Trm112p
Zn_ribbon_LysW
Zn_Ribbon_YjdM
Zn_ribbon_PaaD
Ribosomal_S27e
Cyclin_C
Cyclin_N
Zn_ribbon_Elf1
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QZY03606
LinkDB
All DBs
Position
1069218..1070174
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AA seq
318 aa
AA seq
DB search
MEGPSRQRQREAGESEKQSDEELTCPECSSDNVVMDADQGELVCDDCGLVLDERQIDRGP
EWRAFNHSERQSKSRVGAPVTETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQ
ERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVAT
AALYAACRQEGIPRSLDEVAEVSRVEQKEIGRTYRYISQELGLELKPVDPKQFVPRFASA
LGLSEETQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVT
EVTIRNRYQEQIEAMGFR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccgagccgacagcgacagcgagaggcgggcgagtcggagaaacagtcggac
gaggagctcacgtgtcccgagtgctccagcgacaacgtcgtgatggacgcggaccagggc
gagttggtctgtgacgactgcgggctcgttctcgacgagcgccagatcgaccgcgggccg
gagtggcgggcgttcaaccactccgagcggcagtcgaaatcgcgggttggcgcgcccgtg
acggagacgatgcacgacaaggggctgacgacgaccatcgactggaaggacaaggacgcc
tacggtcgctcgttgagctccgagaagcgctcgcagatgcaccgcctgcgcaagtggcag
gagcgcatccgtaccaaggacgccggcgagcgcaacctccagttcgccctctcggagatc
gaccggatggccagcgcgctcggggttccgcggtcggtacgcgaggtcgcctccgtcatc
tatcgccgcgcgctcaaggaggacctcatccgcggccgctccatcgagggcgtcgccacg
gcggcgctgtacgccgcctgccggcaggagggcatcccgcggtcgctcgacgaggtcgcg
gaggtgtcgcgggtcgaacagaaggagatcggccggacctatcgctacatctcccaggag
ctcggcctcgaactgaagccggtcgaccccaaacagttcgtcccgcggttcgcctccgcg
ctcggcctcagcgaggagacgcaggcgaaggcgaccgagatcatcgacgtgtccgccgag
cagggactgctctcggggaagtcgccgacgggattcgccgccgccgccatctacgcggcc
tccctcctgtgtaacgagaagaagactcaacgcgaggtcgccgacgtggcgcaggtcacc
gaagttaccatccgcaaccggtatcaagagcagatcgaggcgatgggcttccgctga
DBGET
integrated database retrieval system
