Halobaculum roseum: K6T36_06310
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Entry
K6T36_06310 CDS
T07547
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hre
Halobaculum roseum
Pathway
hre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K6T36_06310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hre03019
]
K6T36_06310
03009 Ribosome biogenesis [BR:
hre03009
]
K6T36_06310
04131 Membrane trafficking [BR:
hre04131
]
K6T36_06310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hre04147
]
K6T36_06310
Messenger RNA biogenesis [BR:
hre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K6T36_06310
Ribosome biogenesis [BR:
hre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K6T36_06310
Membrane trafficking [BR:
hre04131
]
SNARE
SNARE associated proteins
Others
K6T36_06310
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K6T36_06310
Exosome [BR:
hre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K6T36_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
TIP49
AAA_22
AAA_33
AAA_2
nSTAND3
AAA_14
IstB_IS21
NPHP3_N
RNA_helicase
AAA_28
AAA_7
Mg_chelatase
AAA_18
ATPase
Sigma54_activat
AAA_lid_PRS2_C
ABC_tran
DUF815
AAA_3
AAA_17
NB-ARC
AAA_24
Parvo_NS1
TsaE
AAA_30
AAA_11
Zeta_toxin
PhoH
ResIII
NACHT
SLFN-g3_helicase
AAA_19
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QZY03771
LinkDB
All DBs
Position
1248547..1250772
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAKKAEKLTLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVDTEPEGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQQEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEILQIHTRGMPLSDDVGLDRLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRDDFQGALAEVEPSAMREVLVELPKVTWEDVGGLDDAQQQVKEAVEW
PLRTPEKFERMGIEAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTVIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMENV
MVIGATNRPDMIDPALIRSGRFDRLVMIGQPDEEGREQILKIHTDDTPLATDVSLRELAE
RTDGYVGSDLESIAREAAIQALREDDDAEDVHMRHFEQAMEAVRPTISEEIMSYYADIEE
QFKGGGTDSLRADRGGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtccaactcgaagtcgcgaaggcgtacccgaacgactccggccgggggatc
gcccgcctcgacccggacaccctgctgcacctgaagctctctccgggcgacatcatcgag
atcgagggggcggaaaccaccgccgcgaaggtgtggcgcgccgaccggcaggactggaac
acggacaccgtccgcatcgacgggttcacgcgccagaacgccgacgtcggtatcggcgaa
cgcgtcacgatccgcaaggccgaggccaagaaggcggagaaactgacgctcgcgccgccc
gaggaggcgtcggtgcagttcggttccgacgccgccggcatggtgaaacgccagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtgatgtcgagcacgaaccacccgttc
atgcgctcgccggggcaggcgatcccgctcatcgccgtcgacaccgagcccgaaggcgtc
tgtctcatcaccgaggacaccgaggtcgaactccgcgaggagcccatctccgggttcgag
aagaccggcggcgggatcacctacgaggacatcggcgggctccaacaggagatccagcgc
gtccgcgagatggtcgagctgccgatgaagcatccccagatcttcaagaagctggggatc
gagcccccgcagggcgtcctgcttcacggcccgcccggcaccgggaagaccctgctcgcg
aaggccgtcgccaacgagacgagcgcgtcgttcttctcgatcgccggtcccgagatcatc
tcgaagtactacggcgagtccgagcaacagctccgcgagatcttcgaggacgcgaaagac
gagtcgccctcgatcatcttcatcgacgagctggactcgatcgcgccgaagcgcgaggac
gtgaccggcgaggtcgagcgccgcgtcgtcgcccagctcctcacgatgatggacgggctg
gagacgcgcggacaggtgatcgtcatcgcggcgaccaaccgcgtcgactccgtcgacccc
gcgctccggcggccgggtcgcttcgaccgcgagatcgagatcggcgtcccggacgaggtc
ggccgcaaggagatcctccagatccacacccgcggcatgccgctgtcggacgacgtcggc
ctcgaccggctggccgacgagacccacgggttcgtcggcgccgacatcgagagcctcacg
aaggaggcggcgatgaaggcgctgcggcgctacctcccggagatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccggatgatcgtcaagcgcgacgacttccagggcgcg
ctcgccgaggtggagccctcggcgatgcgggaggtgctcgtcgaactcccgaaggtcacc
tgggaggatgtcggcggcctcgacgacgcccaacagcaggtgaaggaggccgtcgagtgg
ccgctccggacgcccgagaagttcgagcgaatgggcatcgaggcgcccaagggcgtgctg
ctgtacggcccgcccggcaccggcaagacgctgatggcgaaggccgtcgccaacgagacg
aacgcgaacttcatctcggtgcgcggcccgcagctgctgagcaaatgggtcggcgagtcc
gagaaggcgatccgccagacgttccggaaggcgcggcaggtggccccgacggtcatcttc
ttcgacgagctcgacagcctcgcgcccagccgcggacaggagatggggaacaacgtctcc
gagcgcgtcgtcaaccagctcctgaccgagctcgacgggctggaggagatggagaacgtc
atggtcatcggcgcgacgaaccgcccggacatgatcgatccggcgctcatccgctcgggg
cggttcgaccggctcgtgatgatcggccagcccgacgaggaggggcgcgagcagatcctc
aagatccacaccgacgacacgcccctcgcgacagacgtgagcctccgggagctcgccgag
cgcaccgacggctacgtcggctccgacctcgagtcgatcgcccgcgaggccgccatccag
gcgcttcgcgaggacgacgacgccgaggacgtgcacatgcgccacttcgagcaggcgatg
gaggcggtccggccgaccatctccgaggagatcatgagctactacgcggacatcgaggag
cagttcaagggcggcggcaccgacagcctccgcgccgaccgcggcgggcggatcggcttc
caatga
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