Halobaculum roseum: K6T36_08420
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Entry
K6T36_08420 CDS
T07547
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hre
Halobaculum roseum
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hre03016
]
K6T36_08420 (endA)
Enzymes [BR:
hre01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
K6T36_08420 (endA)
Transfer RNA biogenesis [BR:
hre03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
K6T36_08420 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QZY01375
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All DBs
Position
1663958..1664995
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AA seq
345 aa
AA seq
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MNATLDGDVVRAAGDARQRFHDARGYGRASGPDVTLARVEAAHLLYRGDIDSVSGMDFRA
FFRDSVAGESGFAARFLVYADLRERGFYLAPARDGWPGSADGRAGDADILVFERGEKPGG
PVAHRVRVVGEREELAAASLGGRTLAVVDEESEVSYFACTADGGFDGRTEYDLPAGLDAD
LLDDRVVCWSPPADLYESAFYGQPISGRDDADVDALQLSLVEAADLAARGAVDLDADAVI
ERGRAVEGERFDRRLSVYRELRDRGVVPKTGYKFGADFRTYDAVETVTDLPHSERLVRVV
QPDHRFHPRELALDVRLAGGVRKGMVFALAGDDSNDYLTVERLTP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacactcgacggcgacgtggtccgcgcggcgggcgacgcgcgccagcggttc
cacgacgcccgggggtacggccgcgcgtcggggcccgacgtaaccctcgcacgggtggag
gctgcccatctgctgtatcgcggcgacatcgactcggtctcggggatggacttccgggcg
ttcttccgcgacagcgtcgccggcgagtccggcttcgccgcccggtttctggtgtacgca
gacctgcgcgagcggggcttctatctcgcccccgcccgcgacggctggccggggagcgcg
gacggacgcgccggcgacgccgacatcctcgtgttcgagcgcggcgagaagcccggcggc
ccggtcgcccatcgcgtccgcgtcgtcggcgaacgcgaggagctggcggccgcgtcgctg
gggggacgaacgctcgccgtcgtcgacgaggagagcgaggtgtcgtacttcgcgtgcacg
gccgacggcgggttcgacgggcgaaccgagtacgacctgcccgccggcctcgacgccgac
ctgctcgacgaccgcgtcgtctgctggtcgccgccggccgacctgtacgagtcggcgttc
tacggccagccgatctccgggcgcgacgacgccgacgtcgacgccctccagctgtcgctg
gtcgaggccgccgacctggccgcccgcggcgccgtcgacctcgacgccgacgcggtgatc
gagcgcgggcgggcggtcgagggcgagcggttcgaccgccgtctgtcggtgtatcgcgag
cttcgcgaccgcggcgtcgtccccaagacgggctacaagttcggcgccgacttccggacc
tacgacgccgtggagacggtgacggacctcccgcactccgagcgactcgtccgggtggtg
cagccggaccaccgcttccacccccgcgagttggcgctcgacgtgcgactggccggcggc
gtgcggaagggaatggtttttgcgctcgccggcgacgactcgaacgactacctgacggtc
gagcgactcaccccatga
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