Halobaculum roseum: K6T36_08930
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Entry
K6T36_08930 CDS
T07547
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hre
Halobaculum roseum
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hre03016
]
K6T36_08930 (thpR)
Enzymes [BR:
hre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K6T36_08930 (thpR)
Transfer RNA biogenesis [BR:
hre03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K6T36_08930 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
CATASP
HVSL
Motif
Other DBs
NCBI-ProteinID:
QZY01468
LinkDB
All DBs
Position
complement(1768513..1769073)
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AA seq
186 aa
AA seq
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MPRLFVSVDLPDRLADEFAAVQDPLRDIESLRFTDPEQAHCTVKFLGDTDDSRVGDVVEA
LESAVDSAAVDPFEVEVGDLGVFPSREYISVIWAGVREGHGADELTRLAEAVERETVDRG
FEESDHEFTPHFTLARMDDARGKDRVLDYLDEDPTVGRFEVDEIRLTESTLTEGGPVYET
RTRVSL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgactgttcgtctccgtcgacctgccggaccggctcgcggacgagttcgccgcc
gtccaggacccgcttcgtgacatcgagagcctgcgcttcaccgaccccgagcaggcgcac
tgtacggtgaagttcctcggcgacaccgacgactcgcgcgtcggcgacgtggtcgaggcg
ctggagtcggcggtggactcggccgccgtcgacccgttcgaggtcgaggtcggcgacctc
ggcgtcttcccctcgcgggagtacatcagcgtgatctgggccggcgtccgggagggtcac
ggcgccgacgagctgacgcggctcgctgaggccgtcgagcgcgagacggtcgaccgaggg
ttcgaggagtcggatcacgagttcacgccgcatttcaccctcgcgcggatggacgacgcc
cgcgggaaggacagggtactcgactacctcgacgaggaccccacggtggggcggttcgag
gtggacgagatccggctcacggaatcgacgctgaccgagggcggacccgtgtacgagacg
cggacgcgggtgtcgctgtag
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