Halobaculum roseum: K6T36_09850
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Entry
K6T36_09850 CDS
T07547
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hre
Halobaculum roseum
Pathway
hre03022
Basal transcription factors
hre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T36_09850
09124 Replication and repair
03420 Nucleotide excision repair
K6T36_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hre03021
]
K6T36_09850
03036 Chromosome and associated proteins [BR:
hre03036
]
K6T36_09850
03400 DNA repair and recombination proteins [BR:
hre03400
]
K6T36_09850
Enzymes [BR:
hre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K6T36_09850
Transcription machinery [BR:
hre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K6T36_09850
Chromosome and associated proteins [BR:
hre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K6T36_09850
DNA repair and recombination proteins [BR:
hre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K6T36_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Zot
SLFN-g3_helicase
ATPase
AAA_25
DUF7539
AAA_34
GvpD_P-loop
nSTAND3
AAA_11
HBB
DUF4266
PhoH
PIF1
Motif
Other DBs
NCBI-ProteinID:
QZY01638
LinkDB
All DBs
Position
1950566..1952767
Genome browser
AA seq
733 aa
AA seq
DB search
MSTTDGHLRFFPYDEPYPNQEEAMDRISNSLERGQDVLFEGAPGTGKTLSALVPALQHAR
DHDRTVVITTNVHQQMRQFVEDARAIHETERIRATVFKGKSSMCHIDVDYQECQTLRDTT
RSLVEDRSDKEQLEQRLDDLTDEMREGADGAGGGSGGDAGSAAEARQAVQEELERLDEEI
DDEAANTCDYYLQNLTGDTGEFFSWLFDDVRTPDEVYEYAGSRGFCGYELLKEGMEEVEL
VVCNYHHLLDPQIREQFFRWLDRDPQDVITVFDEAHNVEDAARDHASKTLTENTLESALN
ELEETDDSRAEPAENVLRAFTEALRDTYDEKLGFGAREQVGENWDDVSIANEDRRDDLTL
AFLERYEGQGIRAECDLALQLGKRLDEEYEEAYRDGETTTRRECQTLRAAAFVSAWMDDG
GELGQHPVVSVRRDAGTDEVYGRAELYTCIPREVTAELFDEVYASVLMSATLRPFDVTED
VLGLSDPATLAYGMEYPEENRRTFSVATPALFASERDDPATQETIAATLSDVVRFTPGNS
LLFFPSYAEAERYHELLSGDPNLGTLLLDGSEPDTERLRRRLVDSGGATLFTSLWGTLAE
GVSFDGDDARTVAVVGVPYPHLSERMEAVQEAYDRAFAERSRDAGWEYAVEIPTVRKTRQ
ALGRVIRSPEDFGVRALLDKRYTSADMGKYSVRGAFPVEEREELIDIGPGKLKFAMLNFF
TDHAAYDGEPPEP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgacggacggtcacctgcgcttcttcccgtacgacgagccgtacccgaaccag
gaggaggcgatggatcggatctccaactcgctggagcggggacaggacgtgctgttcgag
ggcgcacccggcaccggcaagacgctctcggcgctcgtgcccgcgctgcagcacgcccgc
gatcacgaccgcaccgtcgtcatcacgacgaacgtccaccagcagatgcgccagttcgtc
gaggacgcccgcgccatccacgagaccgagcgtatccgcgcgaccgtgttcaaggggaag
tcgtcgatgtgccacatcgacgtggactaccaggagtgtcagacgctgcgcgacaccacg
cgctcgctcgtcgaggaccggtccgacaaggagcagttggaacaacggctcgatgatctc
accgacgagatgcgcgagggcgccgacggtgcgggcggcggatccggcggcgacgccgga
agcgccgccgaagccagacaggccgtccaggaggaactggagcgcctcgacgaggagatc
gacgacgaggccgccaacacctgcgactactacctccagaacctcaccggcgacacgggc
gagttcttctcgtggctgttcgacgacgtgcgcacccccgacgaggtgtacgagtacgcc
ggcagccggggattctgcggctacgagctgctgaaagagggaatggaggaggtggagctc
gtcgtctgcaactaccaccacctgctcgacccgcagatacgcgagcagttcttccggtgg
ctcgaccgcgacccgcaggacgtgatcaccgtcttcgacgaggcgcacaacgtcgaggac
gccgcccgcgaccacgcctcgaagacgctcaccgagaacaccctggagtcggccctgaac
gagctggaggagaccgacgactcccgcgccgaacccgcggagaacgtcctccgggcgttc
accgaggcgctgcgggacacctacgacgagaagctggggttcggcgcccgcgagcaggtc
ggcgagaactgggacgacgtgagcatcgccaacgaggaccgtcgcgacgacctgacgctc
gcgttcctggagcgctacgagggacagggcatccgcgcggagtgcgacctggcgctccag
ctcggcaagcgcctcgacgaggagtacgaggaggcgtaccgcgacggggaaacgacgacg
cggcgggagtgtcagaccctccgggcggccgcgttcgtctcggcgtggatggacgacggc
ggcgagctcggccagcacccggtcgtctccgtccggcgcgacgccggcaccgacgaggtg
tacggccgcgcggagctgtacacctgcatcccgcgggaggtgaccgcggagctgttcgac
gaggtgtacgcgagcgtcctcatgtccgccaccctccgcccgttcgacgtgaccgaggac
gtgctcgggctgtcggacccggcgacgctcgcgtacgggatggagtaccccgaggagaac
cgccgaaccttctcggtcgccaccccggcgctgttcgcctccgagcgcgacgaccccgcg
acacaggagacgatcgccgcgacgctgtcggatgtcgtgcggttcacgcccggcaacagc
cttctgttcttcccgtcgtacgcggaggccgagcgctaccacgaactgctttcgggcgac
ccgaacctcggtaccctcctgctcgacggttcggagcccgacaccgagcgactccgccgc
cgcctcgtcgacagcgggggcgcgacgctgttcacgtcgctgtgggggacgctcgccgag
ggcgtgagcttcgacggcgacgacgcccggacggtcgcggtcgtgggcgtgccgtacccg
cacctctccgagcgcatggaggcggtgcaggaggcctacgaccgtgcgttcgccgagcgc
tcacgggacgccggctgggagtacgccgtcgagatcccgaccgtccgcaagacccggcag
gcgctcgggcgggtgatccgctcgcccgaggacttcggcgtgcgcgcgctattggacaaa
cgctacacctccgcggacatgggaaaatactccgtgcgcggcgcgttccccgtggaggag
cgggaggaactgatcgacatcggcccggggaagctgaagttcgcgatgctgaatttcttc
accgaccacgcggcctacgacggggagccgccggagccgtag
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