Halobaculum roseum: K6T36_10965
Help
Entry
K6T36_10965 CDS
T07547
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hre
Halobaculum roseum
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hre03016
]
K6T36_10965 (truD)
Enzymes [BR:
hre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K6T36_10965 (truD)
Transfer RNA biogenesis [BR:
hre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6T36_10965 (truD)
Prokaryotic type
K6T36_10965 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QZY01836
LinkDB
All DBs
Position
2166975..2168339
Genome browser
AA seq
454 aa
AA seq
DB search
MREAHPRERATGVDFYVSDADGIGGRLRVAPEDFRVRERERMDPEPLDAHEGSYPFLLLR
ATLRRWDTNDFASALSNAIGASRERVSWAGTKDKHAVTTQLFTVRDADPEEIPDLDGADI
EVLGRVGRDLTFGDLAGNEFAIRIRETAGDPDPITRDLRAFAAGDSAAAGDSNVAADDTA
VEIAVPNYFGHQRFGSRRPITHEVGLAAIRGDWRGAVLAYCGNPYDTEPEDSQRAREVVE
DQADADSPDWSAALEAMPGRLRYERSMLHRLDEGADWREALEAVPSNLQRLFVNAAQSYV
FNRILSERLRRGLPFDRPVAGDVVAFVERDTAFPKPDMDRLQRATEGRVDTLARHCERGR
AFVTAPLVGTETALADGEPGEIEREILRDLDVDPGDFELPGEFASTGTRRAILLPTDLTV
SAEDGDPVFEFALPSGSYATAVLREYMKCDPERL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggcccatccccgcgagcgcgccacgggcgtcgacttctacgtcagcgacgcc
gacgggatcggcggccgcctccgcgtcgcccccgaggacttccgcgtccgcgagcgcgag
cggatggacccggaaccgctcgacgcccacgagggatcgtaccccttcctcctcctgcgg
gcgaccctccgccgctgggacaccaacgacttcgcgagcgcgctgtcgaacgcgatcggc
gccagccgcgagcgcgtctcgtgggccggcacgaaggacaaacacgccgtcacgacgcag
ctgttcacggtccgcgacgccgaccccgaggagatcccggacctcgacggcgccgacatc
gaggtgctcgggcgggtcgggcgcgacctcaccttcggcgacctcgcgggcaacgagttc
gcgatccggatccgcgagacggcgggtgaccccgatccgatcacccgcgacctgcgggcg
ttcgccgccggcgacagcgccgccgccggcgacagcaacgttgccgccgacgacacggcg
gtcgagatcgcggtgccgaactacttcggccaccagcgcttcgggagccgccggccgatc
acccacgaggtcggcctcgcggcgatccgcggcgactggcgcggcgcggtgctcgcctac
tgcggcaacccgtacgacaccgagccggaggactcccagcgcgcccgcgaggtcgtcgag
gaccaggcggacgccgacagcccggactggagcgccgcgctcgaggcgatgcccggtcgc
ctgcgctacgagcgctcgatgctccaccggctcgacgagggcgccgactggcgtgaggcg
ctggaggcggtcccgtcgaacctccagcggctgttcgtcaacgccgcgcagtcgtacgtg
ttcaaccggatcctctccgagcgcctgcgccgcgggctgccgttcgatcgcccggtcgcg
ggcgacgtggtcgcgttcgtcgagcgggacaccgcgttcccgaagcccgacatggaccgg
ctccagcgggcgaccgaggggcgcgtcgacacgctcgcgcgccactgcgagcgcgggcgg
gcgttcgtcaccgcgccgctggtgggcaccgagacggccctcgcggacggcgagcccggc
gagatcgaacgcgagatcctccgcgacctcgacgtggatccgggcgacttcgagctgccg
ggggagttcgcctccacgggcacccgtcgggcgatcctgctcccgaccgacctgacggtc
tcggcggaggatggcgacccggtgttcgagttcgcgctgccgtcggggtcgtacgcgacg
gcggtgcttcgggagtacatgaagtgcgatccggagcggctctag
DBGET
integrated database retrieval system
