Halobaculum roseum: K6T36_12480
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Entry
K6T36_12480 CDS
T07547
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hre
Halobaculum roseum
Pathway
hre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6T36_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hre03021
]
K6T36_12480
Enzymes [BR:
hre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6T36_12480
Transcription machinery [BR:
hre03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
K6T36_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
Romo1
Motif
Other DBs
NCBI-ProteinID:
QZY02116
LinkDB
All DBs
Position
complement(2455607..2458558)
Genome browser
AA seq
983 aa
AA seq
DB search
MAGQTPKEIGGINFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLE
CRTCGKHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRATCRNCGRLALTAEEKEEYKEK
LQRTKDLGGDPTDVLKSAVRQARKASTCPHCGEPQADIKHEKPTTYYEVQDVLSGDYSEL
ITRAMQPDEPEDEDEEVDESEAISPMDLADETGIALDRINEILSGEFRPRKEDRKAIEKA
LGIDLTVEDMNKLMPSDIRDWFEDIPDEDLEPLGIHPQKSRPEWMILTVLPVPPVTTRPS
ITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFVDNEIS
GTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPER
VAEEMTQVMNVAERNIDRARQYVRNGPEAHPGANYVKRPDGRRLKVTEKNCEELAEKVEP
GWEVNRHLVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMN
MHALQNEEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHDNPEFTETQALD
LLRATSVDELPEPDGTNDAGEPVWTGQTVFSELLPDDLNLEFTSSAGDTVRIENGQLVEG
TIDEDAVGGFGGEIVDTLTKVYSKTRARVFINEVASLAMRSIMHFGFSLGIDDESIPPEA
TEQVDEAIDSAYERVQELIETYERGDLESLPGRTIDETLEMKIMQTLGKARDSAGEIAED
HFADDNPAVIMARSGARGSMLNLTQMTGCVGQQAVRGERINRGYEDRTLAHYEADDLSAE
AHGFVENSYRSGLTPEEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGT
VRDTSGTIVQFEFGEDGTSPVKVSSNEDTPIDIEQITDRIVDAEFGSEQEKERFLGRREA
PTNLSEYAGPGLDKAGGMGVSDD
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccagacacccaaagagatcggcggcatcaacttcgggctgatggacccggag
acgtatcgggacatgtccgcgacgaaggtcatcaccgcggacacctacgacgacgacggc
taccccatcgacatggggctgatggacccgcgcctgggcgtcatcgaccccgggctggag
tgtcgcacctgcggcaagcactccgggtcctgtaacgggcacttcggccacatcgagctg
gccgcccccgtcatccacgtcggcttcacgaagctcatccgtcggctgctgcgcgcgacg
tgccgcaactgcggccgcctcgcgctcaccgccgaggagaaggaggagtacaaggagaag
cttcagcggacgaaggacctcggcggcgaccccaccgacgtgctgaagtcggccgtccga
caggcccgcaaggccagcacgtgcccgcactgcggcgagccgcaggcggacatcaaacac
gagaagccgaccacctactacgaggtgcaggacgtgctctcgggcgactactccgagctc
atcacccgggcgatgcagccggacgagcccgaggacgaggacgaggaggtcgacgagagc
gaggcgatctccccgatggatctggccgacgagacgggcatcgcgctcgaccgcatcaac
gagatcctctcgggcgagttccgcccgcgcaaggaggaccgcaaggcgatcgagaaggcg
ctcggcatcgacctcaccgtcgaggacatgaacaagctgatgccgagcgacatccgcgac
tggttcgaggacatcccggacgaggacctcgaaccgctcggcatccacccgcagaagtcc
cggccggaatggatgatcctgaccgtgcttccggtgccgccggtcacgacgcgcccctcg
atcacgctggacaacggccagcgctccgaggacgacctcacgcacaagctggtcgacatc
atccggatcaaccagcggttcatggagaaccgcgaggccggcgccccgcagctcatcatc
gaggacctgtgggagctgctccagtaccacgtcaccacgttcgtggacaacgagatctcc
ggcacgccgcccgcgcgtcaccgctcgggccgcccgctgaagacgctctcccagcgcctc
aagggcaaggagggtcgcttccgcggttcgctgtccggaaagcgcgtgaacttctccgcg
cggaccgtcatcagccccgaccccaccctctcgctgaacgaggtcggcgtccccgagcgg
gtcgccgaggagatgacgcaggtgatgaacgtcgccgagcgcaacatcgaccgcgcccgg
cagtacgtccgcaacgggcccgaggcccaccccggcgccaactacgtcaagcggcccgac
ggccgccggctgaaggtgacagagaagaactgcgaggagctggccgagaaggtcgagccc
ggctgggaggtgaaccgccacctcgtcgacggcgacatcgtgatcttcaaccggcagccc
tcgctgcaccggatgtcgatcatggcccacgaggtcgtggtcatgccgtacaagacgttc
cgcctcaacaccgtcgtctgtccgccgtacaacgccgacttcgacggcgacgagatgaac
atgcacgcgctccagaacgaggaggcccgcgcggaggcgcgcgtcctcatgcgcgtccag
gagcagatcctctcgccccgcttcggcgagaacatcatcggggccatccaggaccacatc
tcgggcacctacctgctcacccacgacaaccccgagttcaccgagacgcaggcgctggac
ctgcttcgggcgacctcggtcgacgagctgcccgagcccgacggcacgaacgacgccggc
gagcccgtctggacgggccagaccgtgttctcggagctgctgcccgacgacctgaacctg
gagttcacgtcctcggcgggcgacaccgttcgcatcgagaacggccagctggtcgagggg
acgatcgacgaggacgccgtgggcggcttcggcggcgagatcgtcgacacgctcaccaag
gtgtactcgaagacgcgcgcccgcgtgttcatcaacgaggtggcgtcgctggcgatgcgc
tcgatcatgcacttcgggttctcgctgggcatcgacgacgagtcgatcccgccggaggcg
accgagcaggtcgacgaggcgatcgactccgcctacgagcgcgtccaggagctcatcgag
acgtacgagcgcggcgacctcgagagcctaccgggccgcacgatcgacgagacgctggag
atgaagatcatgcagacgctcggcaaggcccgcgacagcgcgggcgagatcgccgaggac
cacttcgccgacgacaacccggcggtcatcatggcgcgctcgggcgcccgcgggtcgatg
ctgaacctgacccagatgaccggctgcgtcggccagcaggcggttcgcggcgagcggatc
aaccgcggctacgaggaccgcacgctcgcgcactacgaggccgacgacctctcggcggag
gcccacggcttcgtggagaactcctaccgctcggggctgacgcccgaggagttcttcttc
cacgcgatgggcggccgcgaggggctcgtcgacactgcggtccggacctccaagtccggg
tacctgcagcgtcgcctcatcaacgccctgtcggaactggagacgcagtacgacggcacg
gtgcgggacacctccggcactatcgtccagttcgagttcggcgaggacggcacctcgccg
gtgaaggtgtcctccaacgaggacacccccatcgacatcgagcagatcaccgaccgcatc
gtcgacgcggagttcggctccgagcaggagaaggagcgcttcctcggccgtcgcgaggcg
ccgacgaacctctcggagtacgccgggccaggcctcgacaaggccggcggcatgggggtg
agcgatgactga
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