Halobaculum roseum: K6T36_12485
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Entry
K6T36_12485 CDS
T07547
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hre
Halobaculum roseum
Pathway
hre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6T36_12485 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hre03021
]
K6T36_12485 (rpoB)
Enzymes [BR:
hre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6T36_12485 (rpoB)
Transcription machinery [BR:
hre03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
K6T36_12485 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
QZY02117
LinkDB
All DBs
Position
complement(2458561..2460390)
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AA seq
609 aa
AA seq
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MASQQREAKVYVNGSLVGTHPDPNQLASQIREARRRGDVSDMVNVSVKDRTNEVIVNADA
GRARRPLIVVENGEPLLDDETIEALENDEIEFEDLVDHGIVEFIDAEEEEDIYVATDEED
VNSRTTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGFDERPAAQNFVVAVMSYEGFNIEDALVMNKGSVDRAMQRS
HFFRTYEGEERRYPGGQEDRFEVPSQDVRGARGEDAYTHLDEDGLVNPETKVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVVGHLAPQEDMPFTEDGLVPDLVMNPHALPSRMTVGHVLEMLGG
KVGSLEGRRVDGTAFQGEGEEKLRSSLEEHGYKSSGKEVMYSGVTGEKIEAEIFVGTIFY
HKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMEREVLIGHGAAMALNERLL
DASDKETVYISEETGMVAVEDVEQRRIYDPITGDEDDIHEMEISYAFKLLLDEMKALGIR
PTLELEDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccaacaacgagaagcgaaagtctacgtcaacgggagcctggtggggacccac
ccggaccccaaccagctcgcgtcacagatccgggaggcgcgccgccgcggcgacgtctcc
gacatggtgaacgtctcggtgaaggaccggacgaacgaggtcatcgtcaacgccgacgcc
gggcgcgcccggcgcccgctcatcgtcgtggagaacggggagccgctcctcgacgacgag
acgatcgaggcgctggagaacgacgagatcgagttcgaggacctcgtcgaccacgggatc
gtcgagttcatcgacgccgaggaggaggaggacatctacgtcgccaccgacgaggaggac
gtcaactcgcggacgacgcacctggagatcgacccgcagctcatcttcggcatcggcgcg
gggatgatcccctaccccgagcacaacgcctctccgcgcattaccatgggcgcggggatg
atgaagcagtcgctcgggctgccctcggccaactatcgcatccggccggacacccgccag
cacctcctgcactacccgcaactgtcgatggtcaagacgcagaccaccgaacagatcggg
ttcgacgagcgccccgcggcgcagaacttcgtcgtcgcggtcatgagttatgaagggttc
aacatcgaggacgcgctcgtcatgaacaaggggagcgtcgaccgcgcgatgcagcggtcg
cacttcttccgcacctacgagggcgaggagcgccgttaccccggcggtcaggaggaccgc
ttcgaggtcccctcccaggacgtgcgcggcgcccgcggcgaggacgcgtacacccacctc
gacgaggacggcctcgtcaaccccgagacgaaggtcgacgagaactccgtcctgctcggg
aagacgagcccgccgcggttcctcgaggagcccgacgacatgggcggcctctccccgcag
aagcgacgcgagacgagcgtcacgatgcgctcgggcgagtcgggcgtggtcgacacggtg
acgctgatggagggcgaggacggctcgaagctctcgaaggtctcggtgcgcgacgagcgg
atccccgagctcggggacaagttcgcgtcccgccacggccagaagggcgtcgtgggccac
ctcgcgccccaggaggacatgccctttaccgaggacgggctcgtgcccgacctcgtgatg
aacccgcacgcgctcccgtcgcgcatgacggtgggccacgtgctggagatgctcggcggc
aaggtcggctcgctggagggccgccgcgtcgacgggacggcgttccagggcgagggagag
gagaagctccgctcgtcgctggaggaacacgggtacaagtcctccgggaaggaggtcatg
tactcgggcgtcaccggcgagaagatcgaggcggagatcttcgtcgggacgatcttctac
cacaagctgtaccacatggtgagcaacaagctgcacgcccgctcgcgcgggccggtgcag
gtgctcacccggcagccgacggaggggcgcgcccgcgagggcggcctccgcgtcggcgag
atggagcgcgaggtgctcatcggccacggggccgcgatggcgctgaacgagcggctgctc
gacgcctccgacaaggagacggtgtacatctccgaggagacggggatggtggccgtcgag
gacgtggagcagcgtcgcatctacgaccccatcacgggcgacgaggacgacatccacgag
atggagatcagctacgcgttcaagctgctgctcgacgagatgaaggcgctcggcattcga
ccgaccctcgaacttgaggacgcagtctaa
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